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Cluster: Rep_499_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_63 Rep_499_c_63_9 10081 13593 - 1.B.14.6.1
STP Rep_499_c_63 Rep_499_c_63_10 13772 14716 - FecR
TF Rep_499_c_63 Rep_499_c_63_11 14893 15441 - GerE
CAZyme Rep_499_c_63 Rep_499_c_63_12 15671 18508 - GH36
CAZyme Rep_499_c_63 Rep_499_c_63_13 18548 20413 - GH2
CAZyme Rep_499_c_63 Rep_499_c_63_14 20616 21716 + GH43_26
NULL(UNKNOWN) Rep_499_c_63 Rep_499_c_63_15 21763 21918 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_499_c_63 Rep_499_c_63_16 21957 24257 - GH3
sulfatase Rep_499_c_63 Rep_499_c_63_17 24310 25527 - S1_7
CAZyme Rep_499_c_63 Rep_499_c_63_18 25823 26338 + GH3
Gene ID: Rep_499_c_63_9
Type: TC
Location: 10081 - 13593 (-)
Gene ID: Rep_499_c_63_10
Type: STP
Location: 13772 - 14716 (-)
Gene ID: Rep_499_c_63_11
Type: TF
Location: 14893 - 15441 (-)
Gene ID: Rep_499_c_63_12
Type: CAZyme
Location: 15671 - 18508 (-)
Gene ID: Rep_499_c_63_13
Type: CAZyme
Location: 18548 - 20413 (-)
Gene ID: Rep_499_c_63_14
Type: CAZyme
Location: 20616 - 21716 (+)
Gene ID: Rep_499_c_63_15
Type:
Location: 21763 - 21918 (-)
Gene ID: Rep_499_c_63_16
Type: CAZyme
Location: 21957 - 24257 (-)
Gene ID: Rep_499_c_63_17
Type: sulfatase
Location: 24310 - 25527 (-)
Gene ID: Rep_499_c_63_18
Type: CAZyme
Location: 25823 - 26338 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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