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Cluster: Rep_499_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_57 Rep_499_c_57_1 251 3166 - GH105 | PL33_2
CAZyme Rep_499_c_57 Rep_499_c_57_2 3337 7212 - GH31_18
CAZyme Rep_499_c_57 Rep_499_c_57_3 7628 9064 + GH29
CAZyme Rep_499_c_57 Rep_499_c_57_4 9084 11192 + GH2
TC Rep_499_c_57 Rep_499_c_57_5 11317 14712 + 1.B.14.6.1
pfam Rep_499_c_57 Rep_499_c_57_6 14733 16718 + SusD_RagB | SusD-like_3
CAZyme Rep_499_c_57 Rep_499_c_57_7 16805 19210 + CBM32
pfam Rep_499_c_57 Rep_499_c_57_8 19244 20398 + F5_F8_type_C
CAZyme Rep_499_c_57 Rep_499_c_57_9 20572 22962 + GH141
Gene ID: Rep_499_c_57_1
Type: CAZyme
Location: 251 - 3166 (-)
Gene ID: Rep_499_c_57_2
Type: CAZyme
Location: 3337 - 7212 (-)
Gene ID: Rep_499_c_57_3
Type: CAZyme
Location: 7628 - 9064 (+)
Gene ID: Rep_499_c_57_4
Type: CAZyme
Location: 9084 - 11192 (+)
Gene ID: Rep_499_c_57_5
Type: TC
Location: 11317 - 14712 (+)
Gene ID: Rep_499_c_57_6
Type: pfam
Location: 14733 - 16718 (+)
Gene ID: Rep_499_c_57_7
Type: CAZyme
Location: 16805 - 19210 (+)
Gene ID: Rep_499_c_57_8
Type: pfam
Location: 19244 - 20398 (+)
Gene ID: Rep_499_c_57_9
Type: CAZyme
Location: 20572 - 22962 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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