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Cluster: Rep_499_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_56 Rep_499_c_56_8 13411 15411 - PL12_2
CAZyme Rep_499_c_56 Rep_499_c_56_9 15440 16726 - GH88
TC Rep_499_c_56 Rep_499_c_56_10 16918 18627 - 8.A.46.1.3
TC Rep_499_c_56 Rep_499_c_56_11 18642 21791 - 1.B.14.6.1
pfam Rep_499_c_56 Rep_499_c_56_12 21823 24264 - SGBP_BT4661-like
CAZyme Rep_499_c_56 Rep_499_c_56_13 24297 26411 - PL12_2
CAZyme Rep_499_c_56 Rep_499_c_56_14 26662 28923 - GH95
CAZyme Rep_499_c_56 Rep_499_c_56_15 28940 31075 - PL12_2
Gene ID: Rep_499_c_56_8
Type: CAZyme
Location: 13411 - 15411 (-)
Gene ID: Rep_499_c_56_9
Type: CAZyme
Location: 15440 - 16726 (-)
Gene ID: Rep_499_c_56_10
Type: TC
Location: 16918 - 18627 (-)
Gene ID: Rep_499_c_56_11
Type: TC
Location: 18642 - 21791 (-)
Gene ID: Rep_499_c_56_12
Type: pfam
Location: 21823 - 24264 (-)
Gene ID: Rep_499_c_56_13
Type: CAZyme
Location: 24297 - 26411 (-)
Gene ID: Rep_499_c_56_14
Type: CAZyme
Location: 26662 - 28923 (-)
Gene ID: Rep_499_c_56_15
Type: CAZyme
Location: 28940 - 31075 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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