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Cluster: Rep_499_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_49 Rep_499_c_49_10 8795 9970 - 1.A.23.4.5
CAZyme Rep_499_c_49 Rep_499_c_49_11 10113 11930 - GH29
CAZyme Rep_499_c_49 Rep_499_c_49_12 12079 15153 - GH2
CAZyme Rep_499_c_49 Rep_499_c_49_13 15180 17504 - GH20
sulfatase Rep_499_c_49 Rep_499_c_49_14 17523 19106 - S1_11
pfam Rep_499_c_49 Rep_499_c_49_15 19334 20668 - DUF4988
CAZyme Rep_499_c_49 Rep_499_c_49_16 20706 22640 - GH16_3
TC Rep_499_c_49 Rep_499_c_49_17 22674 24479 - 8.A.46.1.3
TC Rep_499_c_49 Rep_499_c_49_18 24496 27807 - 1.B.14.6.1
Gene ID: Rep_499_c_49_10
Type: TC
Location: 8795 - 9970 (-)
Gene ID: Rep_499_c_49_11
Type: CAZyme
Location: 10113 - 11930 (-)
Gene ID: Rep_499_c_49_12
Type: CAZyme
Location: 12079 - 15153 (-)
Gene ID: Rep_499_c_49_13
Type: CAZyme
Location: 15180 - 17504 (-)
Gene ID: Rep_499_c_49_14
Type: sulfatase
Location: 17523 - 19106 (-)
Gene ID: Rep_499_c_49_15
Type: pfam
Location: 19334 - 20668 (-)
Gene ID: Rep_499_c_49_16
Type: CAZyme
Location: 20706 - 22640 (-)
Gene ID: Rep_499_c_49_17
Type: TC
Location: 22674 - 24479 (-)
Gene ID: Rep_499_c_49_18
Type: TC
Location: 24496 - 27807 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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