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Cluster: Rep_499_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_48 Rep_499_c_48_9 6929 7549 - 9.B.18.1.3
pfam Rep_499_c_48 Rep_499_c_48_10 7567 8592 - Epimerase | GDP_Man_Dehyd
CAZyme Rep_499_c_48 Rep_499_c_48_11 8598 9758 - GT4
pfam Rep_499_c_48 Rep_499_c_48_12 9767 10672 - 3Beta_HSD | Epimerase
CAZyme Rep_499_c_48 Rep_499_c_48_13 10680 11648 - GT2
CAZyme Rep_499_c_48 Rep_499_c_48_14 11645 12583 - GT2
pfam Rep_499_c_48 Rep_499_c_48_15 12580 13713 - EpsG
CAZyme Rep_499_c_48 Rep_499_c_48_16 13725 14483 - GT32
CAZyme Rep_499_c_48 Rep_499_c_48_17 14491 15771 - GT4
Gene ID: Rep_499_c_48_9
Type: TC
Location: 6929 - 7549 (-)
Gene ID: Rep_499_c_48_10
Type: pfam
Location: 7567 - 8592 (-)
Gene ID: Rep_499_c_48_11
Type: CAZyme
Location: 8598 - 9758 (-)
Gene ID: Rep_499_c_48_12
Type: pfam
Location: 9767 - 10672 (-)
Gene ID: Rep_499_c_48_13
Type: CAZyme
Location: 10680 - 11648 (-)
Gene ID: Rep_499_c_48_14
Type: CAZyme
Location: 11645 - 12583 (-)
Gene ID: Rep_499_c_48_15
Type: pfam
Location: 12580 - 13713 (-)
Gene ID: Rep_499_c_48_16
Type: CAZyme
Location: 13725 - 14483 (-)
Gene ID: Rep_499_c_48_17
Type: CAZyme
Location: 14491 - 15771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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