Cluster: Rep_499_CGC33
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 13
- Substrate:
- Genome ID: Rep_499
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_499_c_46 | Rep_499_c_46_28 | 32713 | 33480 | - | 2.A.79.2.1 |
| NULL(UNKNOWN) | Rep_499_c_46 | Rep_499_c_46_29 | 33676 | 33927 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_499_c_46 | Rep_499_c_46_30 | 34012 | 34560 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_31 | 34740 | 37835 | - | PL29 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_32 | 37866 | 39548 | - | PL1_2 |
| TF | Rep_499_c_46 | Rep_499_c_46_33 | 39607 | 44001 | - | HTH_AraC |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_34 | 44129 | 46768 | - | GH2 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_35 | 46811 | 49123 | - | GH139 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_36 | 49131 | 50552 | - | CE20 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_37 | 50691 | 54011 | - | GH106 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_38 | 54277 | 57129 | - | GH2 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_39 | 57165 | 60446 | - | GH2 |
| pfam | Rep_499_c_46 | Rep_499_c_46_40 | 60596 | 62119 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_41 | 62264 | 66463 | - | CBM57 | CBM97 | GH137 | GH2 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_42 | 66558 | 69257 | - | GH138 |
| pfam | Rep_499_c_46 | Rep_499_c_46_43 | 69582 | 70115 | + | Acetyltransf_1 | Acetyltransf_3 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_44 | 70569 | 72104 | - | GH165 |
| pfam | Rep_499_c_46 | Rep_499_c_46_45 | 72135 | 73976 | - | PKD | PKD | PKD_4 | PKD_4 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_46 | 73988 | 75700 | - | GH165 |
| CAZyme | Rep_499_c_46 | Rep_499_c_46_47 | 75714 | 77396 | - | GH165 |
| sulfatase | Rep_499_c_46 | Rep_499_c_46_48 | 77413 | 79161 | - | S1_27 |
| TC | Rep_499_c_46 | Rep_499_c_46_49 | 79182 | 82430 | - | 1.B.14.6.1 |
Gene ID: Rep_499_c_46_28
Type: TC
Location: 32713 - 33480 (-)
Type: TC
Location: 32713 - 33480 (-)
Gene ID: Rep_499_c_46_29
Type:
Location: 33676 - 33927 (-)
Type:
Location: 33676 - 33927 (-)
Gene ID: Rep_499_c_46_30
Type: STP
Location: 34012 - 34560 (-)
Type: STP
Location: 34012 - 34560 (-)
Gene ID: Rep_499_c_46_31
Type: CAZyme
Location: 34740 - 37835 (-)
Type: CAZyme
Location: 34740 - 37835 (-)
Gene ID: Rep_499_c_46_32
Type: CAZyme
Location: 37866 - 39548 (-)
Type: CAZyme
Location: 37866 - 39548 (-)
Gene ID: Rep_499_c_46_33
Type: TF
Location: 39607 - 44001 (-)
Type: TF
Location: 39607 - 44001 (-)
Gene ID: Rep_499_c_46_34
Type: CAZyme
Location: 44129 - 46768 (-)
Type: CAZyme
Location: 44129 - 46768 (-)
Gene ID: Rep_499_c_46_35
Type: CAZyme
Location: 46811 - 49123 (-)
Type: CAZyme
Location: 46811 - 49123 (-)
Gene ID: Rep_499_c_46_36
Type: CAZyme
Location: 49131 - 50552 (-)
Type: CAZyme
Location: 49131 - 50552 (-)
Gene ID: Rep_499_c_46_37
Type: CAZyme
Location: 50691 - 54011 (-)
Type: CAZyme
Location: 50691 - 54011 (-)
Gene ID: Rep_499_c_46_38
Type: CAZyme
Location: 54277 - 57129 (-)
Type: CAZyme
Location: 54277 - 57129 (-)
Gene ID: Rep_499_c_46_39
Type: CAZyme
Location: 57165 - 60446 (-)
Type: CAZyme
Location: 57165 - 60446 (-)
Gene ID: Rep_499_c_46_40
Type: pfam
Location: 60596 - 62119 (+)
Type: pfam
Location: 60596 - 62119 (+)
Gene ID: Rep_499_c_46_41
Type: CAZyme
Location: 62264 - 66463 (-)
Type: CAZyme
Location: 62264 - 66463 (-)
Gene ID: Rep_499_c_46_42
Type: CAZyme
Location: 66558 - 69257 (-)
Type: CAZyme
Location: 66558 - 69257 (-)
Gene ID: Rep_499_c_46_43
Type: pfam
Location: 69582 - 70115 (+)
Type: pfam
Location: 69582 - 70115 (+)
Gene ID: Rep_499_c_46_44
Type: CAZyme
Location: 70569 - 72104 (-)
Type: CAZyme
Location: 70569 - 72104 (-)
Gene ID: Rep_499_c_46_45
Type: pfam
Location: 72135 - 73976 (-)
Type: pfam
Location: 72135 - 73976 (-)
Gene ID: Rep_499_c_46_46
Type: CAZyme
Location: 73988 - 75700 (-)
Type: CAZyme
Location: 73988 - 75700 (-)
Gene ID: Rep_499_c_46_47
Type: CAZyme
Location: 75714 - 77396 (-)
Type: CAZyme
Location: 75714 - 77396 (-)
Gene ID: Rep_499_c_46_48
Type: sulfatase
Location: 77413 - 79161 (-)
Type: sulfatase
Location: 77413 - 79161 (-)
Gene ID: Rep_499_c_46_49
Type: TC
Location: 79182 - 82430 (-)
Type: TC
Location: 79182 - 82430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_499_c_46_44 | vegan > omnivore | 1.21392 | 0.01332 |