Cluster: Rep_499_CGC32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_499
- CGC Family ID: CGCFAM_01569
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_499_c_44 | Rep_499_c_44_1 | 68 | 544 | - | 3.D.1.5.1 |
| TC | Rep_499_c_44 | Rep_499_c_44_2 | 563 | 2329 | - | 3.D.1.6.1 |
| TC | Rep_499_c_44 | Rep_499_c_44_3 | 2342 | 4249 | - | 3.D.1.5.1 |
| CAZyme | Rep_499_c_44 | Rep_499_c_44_4 | 4410 | 7166 | + | PL40 |
| pfam | Rep_499_c_44 | Rep_499_c_44_5 | 7409 | 7954 | + | DUF3575 |
| TC | Rep_499_c_44 | Rep_499_c_44_6 | 8032 | 10020 | + | 1.B.14.6.8 |
| NULL(UNKNOWN) | Rep_499_c_44 | Rep_499_c_44_7 | 10044 | 12410 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_499_c_44 | Rep_499_c_44_8 | 12528 | 13940 | + | GH28 |
Gene ID: Rep_499_c_44_1
Type: TC
Location: 68 - 544 (-)
Type: TC
Location: 68 - 544 (-)
Gene ID: Rep_499_c_44_2
Type: TC
Location: 563 - 2329 (-)
Type: TC
Location: 563 - 2329 (-)
Gene ID: Rep_499_c_44_3
Type: TC
Location: 2342 - 4249 (-)
Type: TC
Location: 2342 - 4249 (-)
Gene ID: Rep_499_c_44_4
Type: CAZyme
Location: 4410 - 7166 (+)
Type: CAZyme
Location: 4410 - 7166 (+)
Gene ID: Rep_499_c_44_5
Type: pfam
Location: 7409 - 7954 (+)
Type: pfam
Location: 7409 - 7954 (+)
Gene ID: Rep_499_c_44_6
Type: TC
Location: 8032 - 10020 (+)
Type: TC
Location: 8032 - 10020 (+)
Gene ID: Rep_499_c_44_7
Type:
Location: 10044 - 12410 (+)
Type:
Location: 10044 - 12410 (+)
Gene ID: Rep_499_c_44_8
Type: CAZyme
Location: 12528 - 13940 (+)
Type: CAZyme
Location: 12528 - 13940 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.