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Cluster: Rep_499_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_499_c_43 Rep_499_c_43_38 60084 61853 - GH165
TC Rep_499_c_43 Rep_499_c_43_39 61873 63141 - 2.A.1.14.25
pfam Rep_499_c_43 Rep_499_c_43_40 63144 63704 - DUF386
pfam Rep_499_c_43 Rep_499_c_43_41 63746 64675 - DHDPS
CAZyme Rep_499_c_43 Rep_499_c_43_42 64704 66251 - GH165
pfam Rep_499_c_43 Rep_499_c_43_43 66280 68100 - SusD_RagB | SusD-like_3
TC Rep_499_c_43 Rep_499_c_43_44 68127 71357 - 1.B.14.6.1
Gene ID: Rep_499_c_43_38
Type: CAZyme
Location: 60084 - 61853 (-)
Gene ID: Rep_499_c_43_39
Type: TC
Location: 61873 - 63141 (-)
Gene ID: Rep_499_c_43_40
Type: pfam
Location: 63144 - 63704 (-)
Gene ID: Rep_499_c_43_41
Type: pfam
Location: 63746 - 64675 (-)
Gene ID: Rep_499_c_43_42
Type: CAZyme
Location: 64704 - 66251 (-)
Gene ID: Rep_499_c_43_43
Type: pfam
Location: 66280 - 68100 (-)
Gene ID: Rep_499_c_43_44
Type: TC
Location: 68127 - 71357 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_499_c_43_39 vegan > omnivore 14.33465 0.01332
Rep_499_c_43_40 vegan > omnivore 6.15350 0.01332

🧭 Explore Read Mapping of CGC

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