Cluster: Rep_499_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin/host glycan
- Genome ID: Rep_499
- CGC Family ID: CGCFAM_00183
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_499_c_9 | Rep_499_c_9_11 | 11358 | 13862 | - | GH20 |
| NULL(UNKNOWN) | Rep_499_c_9 | Rep_499_c_9_12 | 13933 | 14112 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_499_c_9 | Rep_499_c_9_13 | 14142 | 15551 | + | TIG |
| TC | Rep_499_c_9 | Rep_499_c_9_14 | 15575 | 18685 | + | 1.B.14.6.1 |
| pfam | Rep_499_c_9 | Rep_499_c_9_15 | 18708 | 20741 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_499_c_9 | Rep_499_c_9_16 | 20770 | 21777 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| CAZyme | Rep_499_c_9 | Rep_499_c_9_17 | 21798 | 23756 | + | GH97 |
Gene ID: Rep_499_c_9_11
Type: CAZyme
Location: 11358 - 13862 (-)
Type: CAZyme
Location: 11358 - 13862 (-)
Gene ID: Rep_499_c_9_12
Type:
Location: 13933 - 14112 (-)
Type:
Location: 13933 - 14112 (-)
Gene ID: Rep_499_c_9_13
Type: pfam
Location: 14142 - 15551 (+)
Type: pfam
Location: 14142 - 15551 (+)
Gene ID: Rep_499_c_9_14
Type: TC
Location: 15575 - 18685 (+)
Type: TC
Location: 15575 - 18685 (+)
Gene ID: Rep_499_c_9_15
Type: pfam
Location: 18708 - 20741 (+)
Type: pfam
Location: 18708 - 20741 (+)
Gene ID: Rep_499_c_9_16
Type: pfam
Location: 20770 - 21777 (+)
Type: pfam
Location: 20770 - 21777 (+)
Gene ID: Rep_499_c_9_17
Type: CAZyme
Location: 21798 - 23756 (+)
Type: CAZyme
Location: 21798 - 23756 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.