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Cluster: Rep_499_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_32 Rep_499_c_32_3 2234 4444 + 2.A.37.4.2
pfam Rep_499_c_32 Rep_499_c_32_4 4441 5286 + Patatin | DUF6363
pfam Rep_499_c_32 Rep_499_c_32_5 5349 6371 - WYL
CAZyme Rep_499_c_32 Rep_499_c_32_6 6590 8017 + GH32
pfam Rep_499_c_32 Rep_499_c_32_7 8122 9003 - Aldose_epim
TC Rep_499_c_32 Rep_499_c_32_8 9223 12327 + 1.B.14.6.1
pfam Rep_499_c_32 Rep_499_c_32_9 12355 14064 + SusD_RagB | SusD-like_3
pfam Rep_499_c_32 Rep_499_c_32_10 14079 15473 + DUF4960
CAZyme Rep_499_c_32 Rep_499_c_32_11 15516 17078 + GH32
CAZyme Rep_499_c_32 Rep_499_c_32_12 17209 19041 + GH32
TC Rep_499_c_32 Rep_499_c_32_13 19173 20342 + 2.A.1.7.17
Gene ID: Rep_499_c_32_3
Type: TC
Location: 2234 - 4444 (+)
Gene ID: Rep_499_c_32_4
Type: pfam
Location: 4441 - 5286 (+)
Gene ID: Rep_499_c_32_5
Type: pfam
Location: 5349 - 6371 (-)
Gene ID: Rep_499_c_32_6
Type: CAZyme
Location: 6590 - 8017 (+)
Gene ID: Rep_499_c_32_7
Type: pfam
Location: 8122 - 9003 (-)
Gene ID: Rep_499_c_32_8
Type: TC
Location: 9223 - 12327 (+)
Gene ID: Rep_499_c_32_9
Type: pfam
Location: 12355 - 14064 (+)
Gene ID: Rep_499_c_32_10
Type: pfam
Location: 14079 - 15473 (+)
Gene ID: Rep_499_c_32_11
Type: CAZyme
Location: 15516 - 17078 (+)
Gene ID: Rep_499_c_32_12
Type: CAZyme
Location: 17209 - 19041 (+)
Gene ID: Rep_499_c_32_13
Type: TC
Location: 19173 - 20342 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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