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Cluster: Rep_499_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_499_c_31 Rep_499_c_31_40 62655 65387 - 1.B.14.6.1
pfam Rep_499_c_31 Rep_499_c_31_41 65407 67203 - SusD_RagB
TC Rep_499_c_31 Rep_499_c_31_42 67215 70403 - 1.B.14.6.1
pfam Rep_499_c_31 Rep_499_c_31_43 70426 71343 - DUF4988
pfam Rep_499_c_31 Rep_499_c_31_44 71327 73291 - DUF4988
CAZyme Rep_499_c_31 Rep_499_c_31_45 73459 75852 - GH95
CAZyme Rep_499_c_31 Rep_499_c_31_46 75905 78055 - GH31_14
pfam Rep_499_c_31 Rep_499_c_31_47 78042 79430 - Glyco_hydro_2_C
CAZyme Rep_499_c_31 Rep_499_c_31_48 79484 81784 - GH92
Gene ID: Rep_499_c_31_40
Type: TC
Location: 62655 - 65387 (-)
Gene ID: Rep_499_c_31_41
Type: pfam
Location: 65407 - 67203 (-)
Gene ID: Rep_499_c_31_42
Type: TC
Location: 67215 - 70403 (-)
Gene ID: Rep_499_c_31_43
Type: pfam
Location: 70426 - 71343 (-)
Gene ID: Rep_499_c_31_44
Type: pfam
Location: 71327 - 73291 (-)
Gene ID: Rep_499_c_31_45
Type: CAZyme
Location: 73459 - 75852 (-)
Gene ID: Rep_499_c_31_46
Type: CAZyme
Location: 75905 - 78055 (-)
Gene ID: Rep_499_c_31_47
Type: pfam
Location: 78042 - 79430 (-)
Gene ID: Rep_499_c_31_48
Type: CAZyme
Location: 79484 - 81784 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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