Cluster: Rep_490_CGC22
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_490_c_2 | Rep_490_c_2_1531 | 1915041 | 1917404 | - | 8.A.3.3.4 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1532 | 1917439 | 1918236 | - | Poly_export | SLBB | SLBB_2 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1533 | 1918273 | 1919424 | - | GT4 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1534 | 1919504 | 1920616 | - | GT4 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1535 | 1920613 | 1921752 | - | GT4 |
| NULL(UNKNOWN) | Rep_490_c_2 | Rep_490_c_2_1536 | 1921749 | 1922993 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1537 | 1923006 | 1924004 | - | GT2 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1538 | 1924001 | 1925104 | - | Acyl_transf_3 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1539 | 1925101 | 1925967 | - | GT14 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1540 | 1925967 | 1926827 | - | GT14 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1541 | 1926835 | 1927764 | - | GT32 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1542 | 1927776 | 1928705 | - | GT8 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1543 | 1928716 | 1929516 | - | GT2 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1544 | 1929516 | 1930052 | - | Hexapep |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1545 | 1930109 | 1931092 | - | GT2 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1546 | 1931105 | 1931710 | - | Hexapep | Hexapep_2 |
| TC | Rep_490_c_2 | Rep_490_c_2_1547 | 1931707 | 1933161 | - | 2.A.66.2.23 |
Gene ID: Rep_490_c_2_1531
Type: TC
Location: 1915041 - 1917404 (-)
Type: TC
Location: 1915041 - 1917404 (-)
Gene ID: Rep_490_c_2_1532
Type: pfam
Location: 1917439 - 1918236 (-)
Type: pfam
Location: 1917439 - 1918236 (-)
Gene ID: Rep_490_c_2_1533
Type: CAZyme
Location: 1918273 - 1919424 (-)
Type: CAZyme
Location: 1918273 - 1919424 (-)
Gene ID: Rep_490_c_2_1534
Type: CAZyme
Location: 1919504 - 1920616 (-)
Type: CAZyme
Location: 1919504 - 1920616 (-)
Gene ID: Rep_490_c_2_1535
Type: CAZyme
Location: 1920613 - 1921752 (-)
Type: CAZyme
Location: 1920613 - 1921752 (-)
Gene ID: Rep_490_c_2_1536
Type:
Location: 1921749 - 1922993 (-)
Type:
Location: 1921749 - 1922993 (-)
Gene ID: Rep_490_c_2_1537
Type: CAZyme
Location: 1923006 - 1924004 (-)
Type: CAZyme
Location: 1923006 - 1924004 (-)
Gene ID: Rep_490_c_2_1538
Type: pfam
Location: 1924001 - 1925104 (-)
Type: pfam
Location: 1924001 - 1925104 (-)
Gene ID: Rep_490_c_2_1539
Type: CAZyme
Location: 1925101 - 1925967 (-)
Type: CAZyme
Location: 1925101 - 1925967 (-)
Gene ID: Rep_490_c_2_1540
Type: CAZyme
Location: 1925967 - 1926827 (-)
Type: CAZyme
Location: 1925967 - 1926827 (-)
Gene ID: Rep_490_c_2_1541
Type: CAZyme
Location: 1926835 - 1927764 (-)
Type: CAZyme
Location: 1926835 - 1927764 (-)
Gene ID: Rep_490_c_2_1542
Type: CAZyme
Location: 1927776 - 1928705 (-)
Type: CAZyme
Location: 1927776 - 1928705 (-)
Gene ID: Rep_490_c_2_1543
Type: CAZyme
Location: 1928716 - 1929516 (-)
Type: CAZyme
Location: 1928716 - 1929516 (-)
Gene ID: Rep_490_c_2_1544
Type: pfam
Location: 1929516 - 1930052 (-)
Type: pfam
Location: 1929516 - 1930052 (-)
Gene ID: Rep_490_c_2_1545
Type: CAZyme
Location: 1930109 - 1931092 (-)
Type: CAZyme
Location: 1930109 - 1931092 (-)
Gene ID: Rep_490_c_2_1546
Type: pfam
Location: 1931105 - 1931710 (-)
Type: pfam
Location: 1931105 - 1931710 (-)
Gene ID: Rep_490_c_2_1547
Type: TC
Location: 1931707 - 1933161 (-)
Type: TC
Location: 1931707 - 1933161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.