Cluster: Rep_490_CGC20
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1368 | 1690112 | 1691692 | - | CE20 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1369 | 1691692 | 1692672 | - | DUF5007 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1370 | 1692692 | 1693372 | - | Fasciclin |
| TC | Rep_490_c_2 | Rep_490_c_2_1371 | 1693398 | 1694876 | - | 8.A.46.1.2 |
| TC | Rep_490_c_2 | Rep_490_c_2_1372 | 1694915 | 1698124 | - | 1.B.14.6.1 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1373 | 1698174 | 1701209 | - | CBM32 | GH43_34 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1374 | 1701224 | 1703617 | - | GH127 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1375 | 1703663 | 1706104 | - | GH127 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1376 | 1706833 | 1709601 | + | GH97 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1377 | 1709633 | 1712041 | + | GH127 |
| TC | Rep_490_c_2 | Rep_490_c_2_1378 | 1712190 | 1714703 | - | 9.B.144.1.4 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1379 | 1714822 | 1716240 | - | AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N |
| STP | Rep_490_c_2 | Rep_490_c_2_1380 | 1716425 | 1717996 | + | HATPase_c | HisKA |
| TC | Rep_490_c_2 | Rep_490_c_2_1381 | 1718071 | 1719768 | - | 9.B.174.1.2 |
Gene ID: Rep_490_c_2_1368
Type: CAZyme
Location: 1690112 - 1691692 (-)
Type: CAZyme
Location: 1690112 - 1691692 (-)
Gene ID: Rep_490_c_2_1369
Type: pfam
Location: 1691692 - 1692672 (-)
Type: pfam
Location: 1691692 - 1692672 (-)
Gene ID: Rep_490_c_2_1370
Type: pfam
Location: 1692692 - 1693372 (-)
Type: pfam
Location: 1692692 - 1693372 (-)
Gene ID: Rep_490_c_2_1371
Type: TC
Location: 1693398 - 1694876 (-)
Type: TC
Location: 1693398 - 1694876 (-)
Gene ID: Rep_490_c_2_1372
Type: TC
Location: 1694915 - 1698124 (-)
Type: TC
Location: 1694915 - 1698124 (-)
Gene ID: Rep_490_c_2_1373
Type: CAZyme
Location: 1698174 - 1701209 (-)
Type: CAZyme
Location: 1698174 - 1701209 (-)
Gene ID: Rep_490_c_2_1374
Type: CAZyme
Location: 1701224 - 1703617 (-)
Type: CAZyme
Location: 1701224 - 1703617 (-)
Gene ID: Rep_490_c_2_1375
Type: CAZyme
Location: 1703663 - 1706104 (-)
Type: CAZyme
Location: 1703663 - 1706104 (-)
Gene ID: Rep_490_c_2_1376
Type: CAZyme
Location: 1706833 - 1709601 (+)
Type: CAZyme
Location: 1706833 - 1709601 (+)
Gene ID: Rep_490_c_2_1377
Type: CAZyme
Location: 1709633 - 1712041 (+)
Type: CAZyme
Location: 1709633 - 1712041 (+)
Gene ID: Rep_490_c_2_1378
Type: TC
Location: 1712190 - 1714703 (-)
Type: TC
Location: 1712190 - 1714703 (-)
Gene ID: Rep_490_c_2_1379
Type: pfam
Location: 1714822 - 1716240 (-)
Type: pfam
Location: 1714822 - 1716240 (-)
Gene ID: Rep_490_c_2_1380
Type: STP
Location: 1716425 - 1717996 (+)
Type: STP
Location: 1716425 - 1717996 (+)
Gene ID: Rep_490_c_2_1381
Type: TC
Location: 1718071 - 1719768 (-)
Type: TC
Location: 1718071 - 1719768 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.