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Cluster: Rep_490_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_490_c_2 Rep_490_c_2_542 682025 684013 - GH97
CAZyme Rep_490_c_2 Rep_490_c_2_543 684046 686325 - GH3
CAZyme Rep_490_c_2 Rep_490_c_2_544 686519 687502 - GH43_17
pfam Rep_490_c_2 Rep_490_c_2_545 687561 689519 - SusD_RagB | SusD-like_3
TC Rep_490_c_2 Rep_490_c_2_546 689531 692890 - 1.B.14.6.1
STP Rep_490_c_2 Rep_490_c_2_547 693162 694175 - FecR
TF Rep_490_c_2 Rep_490_c_2_548 694246 694836 - GerE
CAZyme Rep_490_c_2 Rep_490_c_2_549 694964 697156 - GH92
Gene ID: Rep_490_c_2_542
Type: CAZyme
Location: 682025 - 684013 (-)
Gene ID: Rep_490_c_2_543
Type: CAZyme
Location: 684046 - 686325 (-)
Gene ID: Rep_490_c_2_544
Type: CAZyme
Location: 686519 - 687502 (-)
Gene ID: Rep_490_c_2_545
Type: pfam
Location: 687561 - 689519 (-)
Gene ID: Rep_490_c_2_546
Type: TC
Location: 689531 - 692890 (-)
Gene ID: Rep_490_c_2_547
Type: STP
Location: 693162 - 694175 (-)
Gene ID: Rep_490_c_2_548
Type: TF
Location: 694246 - 694836 (-)
Gene ID: Rep_490_c_2_549
Type: CAZyme
Location: 694964 - 697156 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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