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Cluster: Rep_481_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_481_c_298 Rep_481_c_298_25 27339 28661 + 2.A.66.1.28
TC Rep_481_c_298 Rep_481_c_298_26 28726 30045 + 3.A.5.1.1
CAZyme Rep_481_c_298 Rep_481_c_298_27 30275 31375 - GH105
CAZyme Rep_481_c_298 Rep_481_c_298_28 31440 33806 - GH154 | GH88
CAZyme Rep_481_c_298 Rep_481_c_298_29 33803 35353 - GH50
pfam Rep_481_c_298 Rep_481_c_298_30 35378 37198 - BACON | BACON
pfam Rep_481_c_298 Rep_481_c_298_31 37241 38845 - SusD_RagB | SusD-like_3
TC Rep_481_c_298 Rep_481_c_298_32 38864 41923 - 1.B.14.6.1
CAZyme Rep_481_c_298 Rep_481_c_298_33 41985 45014 - CBM96
Gene ID: Rep_481_c_298_25
Type: TC
Location: 27339 - 28661 (+)
Gene ID: Rep_481_c_298_26
Type: TC
Location: 28726 - 30045 (+)
Gene ID: Rep_481_c_298_27
Type: CAZyme
Location: 30275 - 31375 (-)
Gene ID: Rep_481_c_298_28
Type: CAZyme
Location: 31440 - 33806 (-)
Gene ID: Rep_481_c_298_29
Type: CAZyme
Location: 33803 - 35353 (-)
Gene ID: Rep_481_c_298_30
Type: pfam
Location: 35378 - 37198 (-)
Gene ID: Rep_481_c_298_31
Type: pfam
Location: 37241 - 38845 (-)
Gene ID: Rep_481_c_298_32
Type: TC
Location: 38864 - 41923 (-)
Gene ID: Rep_481_c_298_33
Type: CAZyme
Location: 41985 - 45014 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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