Cluster: Rep_481_CGC51
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_481
- CGC Family ID: CGCFAM_00985
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_481_c_280 | Rep_481_c_280_14 | 18348 | 19214 | - | 9.B.2.1.6 |
| pfam | Rep_481_c_280 | Rep_481_c_280_15 | 19328 | 20371 | + | LRR_5 | LRR_5 |
| TC | Rep_481_c_280 | Rep_481_c_280_16 | 20477 | 22093 | - | 3.A.1.121.4 |
| TC | Rep_481_c_280 | Rep_481_c_280_17 | 22271 | 22858 | + | 3.A.8.1.1 |
| pfam | Rep_481_c_280 | Rep_481_c_280_18 | 22886 | 24058 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_19 | 24127 | 26628 | - | GH2 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_20 | 26749 | 29010 | - | GH92 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_21 | 29058 | 31133 | - | GH20 |
| pfam | Rep_481_c_280 | Rep_481_c_280_22 | 31141 | 32355 | - | NANM | NANM |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_23 | 32367 | 34691 | - | GH20 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_24 | 34713 | 37286 | - | GH2 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_25 | 37307 | 39379 | - | CE20 |
| sulfatase | Rep_481_c_280 | Rep_481_c_280_26 | 39376 | 40041 | - | S1_16 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_27 | 40048 | 42063 | - | GH20 |
| CAZyme | Rep_481_c_280 | Rep_481_c_280_28 | 42230 | 43864 | - | CBM93 | GH33 |
Gene ID: Rep_481_c_280_14
Type: TC
Location: 18348 - 19214 (-)
Type: TC
Location: 18348 - 19214 (-)
Gene ID: Rep_481_c_280_15
Type: pfam
Location: 19328 - 20371 (+)
Type: pfam
Location: 19328 - 20371 (+)
Gene ID: Rep_481_c_280_16
Type: TC
Location: 20477 - 22093 (-)
Type: TC
Location: 20477 - 22093 (-)
Gene ID: Rep_481_c_280_17
Type: TC
Location: 22271 - 22858 (+)
Type: TC
Location: 22271 - 22858 (+)
Gene ID: Rep_481_c_280_18
Type: pfam
Location: 22886 - 24058 (+)
Type: pfam
Location: 22886 - 24058 (+)
Gene ID: Rep_481_c_280_19
Type: CAZyme
Location: 24127 - 26628 (-)
Type: CAZyme
Location: 24127 - 26628 (-)
Gene ID: Rep_481_c_280_20
Type: CAZyme
Location: 26749 - 29010 (-)
Type: CAZyme
Location: 26749 - 29010 (-)
Gene ID: Rep_481_c_280_21
Type: CAZyme
Location: 29058 - 31133 (-)
Type: CAZyme
Location: 29058 - 31133 (-)
Gene ID: Rep_481_c_280_22
Type: pfam
Location: 31141 - 32355 (-)
Type: pfam
Location: 31141 - 32355 (-)
Gene ID: Rep_481_c_280_23
Type: CAZyme
Location: 32367 - 34691 (-)
Type: CAZyme
Location: 32367 - 34691 (-)
Gene ID: Rep_481_c_280_24
Type: CAZyme
Location: 34713 - 37286 (-)
Type: CAZyme
Location: 34713 - 37286 (-)
Gene ID: Rep_481_c_280_25
Type: CAZyme
Location: 37307 - 39379 (-)
Type: CAZyme
Location: 37307 - 39379 (-)
Gene ID: Rep_481_c_280_26
Type: sulfatase
Location: 39376 - 40041 (-)
Type: sulfatase
Location: 39376 - 40041 (-)
Gene ID: Rep_481_c_280_27
Type: CAZyme
Location: 40048 - 42063 (-)
Type: CAZyme
Location: 40048 - 42063 (-)
Gene ID: Rep_481_c_280_28
Type: CAZyme
Location: 42230 - 43864 (-)
Type: CAZyme
Location: 42230 - 43864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.