Cluster: Rep_481_CGC47
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_481
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_481_c_258 | Rep_481_c_258_2 | 857 | 2500 | - | CE12 | CE12 |
| CAZyme | Rep_481_c_258 | Rep_481_c_258_3 | 2553 | 4382 | - | PL11_1 |
| CAZyme | Rep_481_c_258 | Rep_481_c_258_4 | 4429 | 7488 | - | GH2 |
| pfam | Rep_481_c_258 | Rep_481_c_258_5 | 7829 | 10171 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_481_c_258 | Rep_481_c_258_6 | 10195 | 13578 | - | 1.B.14.6.1 |
| CAZyme | Rep_481_c_258 | Rep_481_c_258_7 | 13997 | 15127 | + | GH105 |
| CAZyme | Rep_481_c_258 | Rep_481_c_258_8 | 15467 | 18334 | + | GH2 |
| CAZyme | Rep_481_c_258 | Rep_481_c_258_9 | 18541 | 20502 | - | GH20 |
| STP | Rep_481_c_258 | Rep_481_c_258_10 | 20578 | 21837 | + | EPSP_synthase |
| NULL(UNKNOWN) | Rep_481_c_258 | Rep_481_c_258_11 | 21824 | 23023 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_481_c_258 | Rep_481_c_258_12 | 23020 | 24438 | - | 2.A.3.8.28 |
| peptidase | Rep_481_c_258 | Rep_481_c_258_13 | 24442 | 25446 | - | M28.UPA |
| NULL(UNKNOWN) | Rep_481_c_258 | Rep_481_c_258_14 | 25548 | 26018 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_481_c_258 | Rep_481_c_258_15 | 26015 | 26887 | + | 3.A.1.15.13 |
Gene ID: Rep_481_c_258_2
Type: CAZyme
Location: 857 - 2500 (-)
Type: CAZyme
Location: 857 - 2500 (-)
Gene ID: Rep_481_c_258_3
Type: CAZyme
Location: 2553 - 4382 (-)
Type: CAZyme
Location: 2553 - 4382 (-)
Gene ID: Rep_481_c_258_4
Type: CAZyme
Location: 4429 - 7488 (-)
Type: CAZyme
Location: 4429 - 7488 (-)
Gene ID: Rep_481_c_258_5
Type: pfam
Location: 7829 - 10171 (-)
Type: pfam
Location: 7829 - 10171 (-)
Gene ID: Rep_481_c_258_6
Type: TC
Location: 10195 - 13578 (-)
Type: TC
Location: 10195 - 13578 (-)
Gene ID: Rep_481_c_258_7
Type: CAZyme
Location: 13997 - 15127 (+)
Type: CAZyme
Location: 13997 - 15127 (+)
Gene ID: Rep_481_c_258_8
Type: CAZyme
Location: 15467 - 18334 (+)
Type: CAZyme
Location: 15467 - 18334 (+)
Gene ID: Rep_481_c_258_9
Type: CAZyme
Location: 18541 - 20502 (-)
Type: CAZyme
Location: 18541 - 20502 (-)
Gene ID: Rep_481_c_258_10
Type: STP
Location: 20578 - 21837 (+)
Type: STP
Location: 20578 - 21837 (+)
Gene ID: Rep_481_c_258_11
Type:
Location: 21824 - 23023 (-)
Type:
Location: 21824 - 23023 (-)
Gene ID: Rep_481_c_258_12
Type: TC
Location: 23020 - 24438 (-)
Type: TC
Location: 23020 - 24438 (-)
Gene ID: Rep_481_c_258_13
Type: peptidase
Location: 24442 - 25446 (-)
Type: peptidase
Location: 24442 - 25446 (-)
Gene ID: Rep_481_c_258_14
Type:
Location: 25548 - 26018 (+)
Type:
Location: 25548 - 26018 (+)
Gene ID: Rep_481_c_258_15
Type: TC
Location: 26015 - 26887 (+)
Type: TC
Location: 26015 - 26887 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.