dbCAN Logo

Cluster: Rep_481_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_481_c_147 Rep_481_c_147_3 1696 3456 + 3.A.2.3.3
TC Rep_481_c_147 Rep_481_c_147_4 3488 4807 + 3.A.2.3.3
pfam Rep_481_c_147 Rep_481_c_147_5 4826 5431 + ATP-synt_D
TC Rep_481_c_147 Rep_481_c_147_6 5428 7239 + 3.A.2.2.2
TC Rep_481_c_147 Rep_481_c_147_7 7283 7744 + 3.A.2.2.2
CAZyme Rep_481_c_147 Rep_481_c_147_8 8005 9666 + GT3
CAZyme Rep_481_c_147 Rep_481_c_147_9 9702 12266 + GT35
pfam Rep_481_c_147 Rep_481_c_147_10 12586 13689 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
pfam Rep_481_c_147 Rep_481_c_147_11 13785 14525 - DUF4369
TC Rep_481_c_147 Rep_481_c_147_12 14669 16054 + 3.A.1.11.8
TC Rep_481_c_147 Rep_481_c_147_13 16066 16866 + 3.A.1.11.8
TC Rep_481_c_147 Rep_481_c_147_14 16860 17648 + 3.A.1.11.8
Gene ID: Rep_481_c_147_3
Type: TC
Location: 1696 - 3456 (+)
Gene ID: Rep_481_c_147_4
Type: TC
Location: 3488 - 4807 (+)
Gene ID: Rep_481_c_147_5
Type: pfam
Location: 4826 - 5431 (+)
Gene ID: Rep_481_c_147_6
Type: TC
Location: 5428 - 7239 (+)
Gene ID: Rep_481_c_147_7
Type: TC
Location: 7283 - 7744 (+)
Gene ID: Rep_481_c_147_8
Type: CAZyme
Location: 8005 - 9666 (+)
Gene ID: Rep_481_c_147_9
Type: CAZyme
Location: 9702 - 12266 (+)
Gene ID: Rep_481_c_147_10
Type: pfam
Location: 12586 - 13689 (-)
Gene ID: Rep_481_c_147_11
Type: pfam
Location: 13785 - 14525 (-)
Gene ID: Rep_481_c_147_12
Type: TC
Location: 14669 - 16054 (+)
Gene ID: Rep_481_c_147_13
Type: TC
Location: 16066 - 16866 (+)
Gene ID: Rep_481_c_147_14
Type: TC
Location: 16860 - 17648 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_481_c_147_13 vegan > omnivore 1.81457 0.01560
Rep_481_c_147_13 vegetarian > omnivore 2.65433 0.03201

🧭 Explore Read Mapping of CGC

← Back to Cluster List