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Cluster: Rep_481_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_481_c_107 Rep_481_c_107_8 16432 17577 - GH105
CAZyme Rep_481_c_107 Rep_481_c_107_9 17570 18829 - GH154
CAZyme Rep_481_c_107 Rep_481_c_107_10 18848 20764 - GH16_3 | GH43_24
pfam Rep_481_c_107 Rep_481_c_107_11 20800 22848 - SusD_RagB | SusD-like_3
TC Rep_481_c_107 Rep_481_c_107_12 22868 26158 - 1.B.14.6.1
pfam Rep_481_c_107 Rep_481_c_107_13 26559 27194 + HU-HIG
TF Rep_481_c_107 Rep_481_c_107_14 27166 31332 - HTH_AraC
CAZyme Rep_481_c_107 Rep_481_c_107_15 31404 32945 - GH51_1
CAZyme Rep_481_c_107 Rep_481_c_107_16 32958 35297 - GH35
Gene ID: Rep_481_c_107_8
Type: CAZyme
Location: 16432 - 17577 (-)
Gene ID: Rep_481_c_107_9
Type: CAZyme
Location: 17570 - 18829 (-)
Gene ID: Rep_481_c_107_10
Type: CAZyme
Location: 18848 - 20764 (-)
Gene ID: Rep_481_c_107_11
Type: pfam
Location: 20800 - 22848 (-)
Gene ID: Rep_481_c_107_12
Type: TC
Location: 22868 - 26158 (-)
Gene ID: Rep_481_c_107_13
Type: pfam
Location: 26559 - 27194 (+)
Gene ID: Rep_481_c_107_14
Type: TF
Location: 27166 - 31332 (-)
Gene ID: Rep_481_c_107_15
Type: CAZyme
Location: 31404 - 32945 (-)
Gene ID: Rep_481_c_107_16
Type: CAZyme
Location: 32958 - 35297 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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