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Cluster: Rep_480_CGC82

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_288 Rep_480_c_288_1 48 2063 + GH127
CAZyme Rep_480_c_288 Rep_480_c_288_2 2197 5292 + GH2
CAZyme Rep_480_c_288 Rep_480_c_288_3 5326 7803 + CBM91 | GH43_19 | GH43_9
TF Rep_480_c_288 Rep_480_c_288_4 7800 11882 - HTH_AraC
NULL(UNKNOWN) Rep_480_c_288 Rep_480_c_288_5 11916 12053 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_480_c_288 Rep_480_c_288_6 12168 15512 + 1.B.14.6.2
pfam Rep_480_c_288 Rep_480_c_288_7 15529 17550 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) Rep_480_c_288 Rep_480_c_288_8 17620 19230 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_480_c_288 Rep_480_c_288_9 19376 20509 + GH43_24
Gene ID: Rep_480_c_288_1
Type: CAZyme
Location: 48 - 2063 (+)
Gene ID: Rep_480_c_288_2
Type: CAZyme
Location: 2197 - 5292 (+)
Gene ID: Rep_480_c_288_3
Type: CAZyme
Location: 5326 - 7803 (+)
Gene ID: Rep_480_c_288_4
Type: TF
Location: 7800 - 11882 (-)
Gene ID: Rep_480_c_288_5
Type:
Location: 11916 - 12053 (+)
Gene ID: Rep_480_c_288_6
Type: TC
Location: 12168 - 15512 (+)
Gene ID: Rep_480_c_288_7
Type: pfam
Location: 15529 - 17550 (+)
Gene ID: Rep_480_c_288_8
Type:
Location: 17620 - 19230 (+)
Gene ID: Rep_480_c_288_9
Type: CAZyme
Location: 19376 - 20509 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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