dbCAN Logo

Cluster: Rep_480_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_480_c_274 Rep_480_c_274_21 23928 27332 + 1.B.14.6.1
pfam Rep_480_c_274 Rep_480_c_274_22 27345 29324 + SusD_RagB | SusD-like_3
pfam Rep_480_c_274 Rep_480_c_274_23 29345 30061 + DUF3823 | DUF3823_C
CAZyme Rep_480_c_274 Rep_480_c_274_24 30081 33104 + GH55_3
CAZyme Rep_480_c_274 Rep_480_c_274_25 33119 36127 + GH55_3
NULL(UNKNOWN) Rep_480_c_274 Rep_480_c_274_26 36211 36657 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_480_c_274 Rep_480_c_274_27 36724 37824 - DUF6340
TC Rep_480_c_274 Rep_480_c_274_28 38040 41336 - 3.A.5.1.1
Gene ID: Rep_480_c_274_21
Type: TC
Location: 23928 - 27332 (+)
Gene ID: Rep_480_c_274_22
Type: pfam
Location: 27345 - 29324 (+)
Gene ID: Rep_480_c_274_23
Type: pfam
Location: 29345 - 30061 (+)
Gene ID: Rep_480_c_274_24
Type: CAZyme
Location: 30081 - 33104 (+)
Gene ID: Rep_480_c_274_25
Type: CAZyme
Location: 33119 - 36127 (+)
Gene ID: Rep_480_c_274_26
Type:
Location: 36211 - 36657 (-)
Gene ID: Rep_480_c_274_27
Type: pfam
Location: 36724 - 37824 (-)
Gene ID: Rep_480_c_274_28
Type: TC
Location: 38040 - 41336 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List