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Cluster: Rep_480_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_222 Rep_480_c_222_28 53451 54908 - GH28
NULL(UNKNOWN) Rep_480_c_222 Rep_480_c_222_29 54982 55851 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_480_c_222 Rep_480_c_222_30 56292 56552 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_480_c_222 Rep_480_c_222_31 56644 59001 - GH31_4
TF Rep_480_c_222 Rep_480_c_222_32 59080 61314 - HTH_AraC
CAZyme Rep_480_c_222 Rep_480_c_222_33 61529 65014 + GH146
NULL(UNKNOWN) Rep_480_c_222 Rep_480_c_222_34 65040 66245 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_480_c_222 Rep_480_c_222_35 66283 66927 - 3.A.1.19.5
Gene ID: Rep_480_c_222_28
Type: CAZyme
Location: 53451 - 54908 (-)
Gene ID: Rep_480_c_222_29
Type:
Location: 54982 - 55851 (-)
Gene ID: Rep_480_c_222_30
Type:
Location: 56292 - 56552 (+)
Gene ID: Rep_480_c_222_31
Type: CAZyme
Location: 56644 - 59001 (-)
Gene ID: Rep_480_c_222_32
Type: TF
Location: 59080 - 61314 (-)
Gene ID: Rep_480_c_222_33
Type: CAZyme
Location: 61529 - 65014 (+)
Gene ID: Rep_480_c_222_34
Type:
Location: 65040 - 66245 (-)
Gene ID: Rep_480_c_222_35
Type: TC
Location: 66283 - 66927 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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