Cluster: Rep_480_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_480
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_480_c_16 | Rep_480_c_16_19 | 23685 | 25076 | + | GH23 |
| STP | Rep_480_c_16 | Rep_480_c_16_20 | 25197 | 27968 | - | B12-binding | B12-binding_2 |
| pfam | Rep_480_c_16 | Rep_480_c_16_21 | 27971 | 28423 | - | SmpB |
| TC | Rep_480_c_16 | Rep_480_c_16_22 | 28473 | 29045 | - | 9.B.29.3.6 |
Gene ID: Rep_480_c_16_19
Type: CAZyme
Location: 23685 - 25076 (+)
Type: CAZyme
Location: 23685 - 25076 (+)
Gene ID: Rep_480_c_16_20
Type: STP
Location: 25197 - 27968 (-)
Type: STP
Location: 25197 - 27968 (-)
Gene ID: Rep_480_c_16_21
Type: pfam
Location: 27971 - 28423 (-)
Type: pfam
Location: 27971 - 28423 (-)
Gene ID: Rep_480_c_16_22
Type: TC
Location: 28473 - 29045 (-)
Type: TC
Location: 28473 - 29045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.