Cluster: Rep_480_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_480
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_480_c_96 | Rep_480_c_96_37 | 39664 | 40710 | + | GH130_4 |
| TC | Rep_480_c_96 | Rep_480_c_96_38 | 40722 | 41963 | + | 2.A.1.33.2 |
| NULL(UNKNOWN) | Rep_480_c_96 | Rep_480_c_96_39 | 41977 | 43641 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_480_c_96 | Rep_480_c_96_40 | 43691 | 46750 | + | 1.B.14.6.1 |
| TC | Rep_480_c_96 | Rep_480_c_96_41 | 46771 | 48330 | + | 8.A.46.1.3 |
| CAZyme | Rep_480_c_96 | Rep_480_c_96_42 | 48630 | 49664 | + | GH130_3 |
| CAZyme | Rep_480_c_96 | Rep_480_c_96_43 | 49696 | 50886 | + | GH130 |
Gene ID: Rep_480_c_96_37
Type: CAZyme
Location: 39664 - 40710 (+)
Type: CAZyme
Location: 39664 - 40710 (+)
Gene ID: Rep_480_c_96_38
Type: TC
Location: 40722 - 41963 (+)
Type: TC
Location: 40722 - 41963 (+)
Gene ID: Rep_480_c_96_39
Type:
Location: 41977 - 43641 (+)
Type:
Location: 41977 - 43641 (+)
Gene ID: Rep_480_c_96_40
Type: TC
Location: 43691 - 46750 (+)
Type: TC
Location: 43691 - 46750 (+)
Gene ID: Rep_480_c_96_41
Type: TC
Location: 46771 - 48330 (+)
Type: TC
Location: 46771 - 48330 (+)
Gene ID: Rep_480_c_96_42
Type: CAZyme
Location: 48630 - 49664 (+)
Type: CAZyme
Location: 48630 - 49664 (+)
Gene ID: Rep_480_c_96_43
Type: CAZyme
Location: 49696 - 50886 (+)
Type: CAZyme
Location: 49696 - 50886 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.