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Cluster: Rep_480_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_480_c_39 Rep_480_c_39_7 11951 13162 - 2.A.1.35.1
pfam Rep_480_c_39 Rep_480_c_39_8 13178 13711 - DNA_binding_1 | Methyltransf_1N
CAZyme Rep_480_c_39 Rep_480_c_39_9 13948 15906 + GH97
CAZyme Rep_480_c_39 Rep_480_c_39_10 16070 17695 + CBM91 | GH43_10
CAZyme Rep_480_c_39 Rep_480_c_39_11 17716 18936 + GH88
CAZyme Rep_480_c_39 Rep_480_c_39_12 19061 19921 + GH16_3
CAZyme Rep_480_c_39 Rep_480_c_39_13 19962 21215 + GH154
CAZyme Rep_480_c_39 Rep_480_c_39_14 21208 22539 + PL42
CAZyme Rep_480_c_39 Rep_480_c_39_15 22555 23673 + GH105
CAZyme Rep_480_c_39 Rep_480_c_39_16 23786 26689 + GH43_19 | GH97
Gene ID: Rep_480_c_39_7
Type: TC
Location: 11951 - 13162 (-)
Gene ID: Rep_480_c_39_8
Type: pfam
Location: 13178 - 13711 (-)
Gene ID: Rep_480_c_39_9
Type: CAZyme
Location: 13948 - 15906 (+)
Gene ID: Rep_480_c_39_10
Type: CAZyme
Location: 16070 - 17695 (+)
Gene ID: Rep_480_c_39_11
Type: CAZyme
Location: 17716 - 18936 (+)
Gene ID: Rep_480_c_39_12
Type: CAZyme
Location: 19061 - 19921 (+)
Gene ID: Rep_480_c_39_13
Type: CAZyme
Location: 19962 - 21215 (+)
Gene ID: Rep_480_c_39_14
Type: CAZyme
Location: 21208 - 22539 (+)
Gene ID: Rep_480_c_39_15
Type: CAZyme
Location: 22555 - 23673 (+)
Gene ID: Rep_480_c_39_16
Type: CAZyme
Location: 23786 - 26689 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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