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Cluster: Rep_480_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_27 Rep_480_c_27_3 2483 4720 + GH92
TF Rep_480_c_27 Rep_480_c_27_4 4735 5328 + GerE
STP Rep_480_c_27 Rep_480_c_27_5 5325 6329 + FecR
CAZyme Rep_480_c_27 Rep_480_c_27_6 6357 8633 + GH92
TC Rep_480_c_27 Rep_480_c_27_7 8831 12193 + 1.B.14.6.13
TC Rep_480_c_27 Rep_480_c_27_8 12198 13811 + 8.A.46.2.2
pfam Rep_480_c_27 Rep_480_c_27_9 13832 14833 + GH18_BT1044-like
pfam Rep_480_c_27 Rep_480_c_27_10 14842 16017 + BT_3987-like_N | Laminin_G_3
CAZyme Rep_480_c_27 Rep_480_c_27_11 16048 18015 + GH18
CAZyme Rep_480_c_27 Rep_480_c_27_12 18132 20141 + GH97
CAZyme Rep_480_c_27 Rep_480_c_27_13 20168 22438 + GH92
Gene ID: Rep_480_c_27_3
Type: CAZyme
Location: 2483 - 4720 (+)
Gene ID: Rep_480_c_27_4
Type: TF
Location: 4735 - 5328 (+)
Gene ID: Rep_480_c_27_5
Type: STP
Location: 5325 - 6329 (+)
Gene ID: Rep_480_c_27_6
Type: CAZyme
Location: 6357 - 8633 (+)
Gene ID: Rep_480_c_27_7
Type: TC
Location: 8831 - 12193 (+)
Gene ID: Rep_480_c_27_8
Type: TC
Location: 12198 - 13811 (+)
Gene ID: Rep_480_c_27_9
Type: pfam
Location: 13832 - 14833 (+)
Gene ID: Rep_480_c_27_10
Type: pfam
Location: 14842 - 16017 (+)
Gene ID: Rep_480_c_27_11
Type: CAZyme
Location: 16048 - 18015 (+)
Gene ID: Rep_480_c_27_12
Type: CAZyme
Location: 18132 - 20141 (+)
Gene ID: Rep_480_c_27_13
Type: CAZyme
Location: 20168 - 22438 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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