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Cluster: Rep_480_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_480_c_8 Rep_480_c_8_8 5561 6325 - GT2
pfam Rep_480_c_8 Rep_480_c_8_9 6522 7709 - DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC Rep_480_c_8 Rep_480_c_8_10 7721 8356 - 3.A.8.1.1
TC Rep_480_c_8 Rep_480_c_8_11 8582 10192 + 3.A.1.121.4
pfam Rep_480_c_8 Rep_480_c_8_12 10218 11258 - LRR_5 | LRR_5
TC Rep_480_c_8 Rep_480_c_8_13 11387 12226 + 9.B.2.1.6
pfam Rep_480_c_8 Rep_480_c_8_14 12234 14375 - S1 | Tex_N | HHH_3 | HHH_7 | YqgF | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC Rep_480_c_8 Rep_480_c_8_15 14486 16402 + 2.A.21.9.2
Gene ID: Rep_480_c_8_8
Type: CAZyme
Location: 5561 - 6325 (-)
Gene ID: Rep_480_c_8_9
Type: pfam
Location: 6522 - 7709 (-)
Gene ID: Rep_480_c_8_10
Type: TC
Location: 7721 - 8356 (-)
Gene ID: Rep_480_c_8_11
Type: TC
Location: 8582 - 10192 (+)
Gene ID: Rep_480_c_8_12
Type: pfam
Location: 10218 - 11258 (-)
Gene ID: Rep_480_c_8_13
Type: TC
Location: 11387 - 12226 (+)
Gene ID: Rep_480_c_8_14
Type: pfam
Location: 12234 - 14375 (-)
Gene ID: Rep_480_c_8_15
Type: TC
Location: 14486 - 16402 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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