Cluster: Rep_479_CGC60
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_479
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_479_c_385 | Rep_479_c_385_6 | 5878 | 8199 | - | GH20 |
| CAZyme | Rep_479_c_385 | Rep_479_c_385_7 | 8196 | 9647 | - | GH125 |
| CAZyme | Rep_479_c_385 | Rep_479_c_385_8 | 9787 | 11388 | - | GH63 |
| pfam | Rep_479_c_385 | Rep_479_c_385_9 | 11426 | 12541 | - | Alk_phosphatase | Metalloenzyme |
| pfam | Rep_479_c_385 | Rep_479_c_385_10 | 12627 | 13490 | - | Exo_endo_phos |
| CAZyme | Rep_479_c_385 | Rep_479_c_385_11 | 13631 | 16582 | - | GH92 |
| TC | Rep_479_c_385 | Rep_479_c_385_12 | 16739 | 18388 | - | 8.A.46.1.3 |
| TC | Rep_479_c_385 | Rep_479_c_385_13 | 18401 | 21598 | - | 1.B.14.6.1 |
Gene ID: Rep_479_c_385_6
Type: CAZyme
Location: 5878 - 8199 (-)
Type: CAZyme
Location: 5878 - 8199 (-)
Gene ID: Rep_479_c_385_7
Type: CAZyme
Location: 8196 - 9647 (-)
Type: CAZyme
Location: 8196 - 9647 (-)
Gene ID: Rep_479_c_385_8
Type: CAZyme
Location: 9787 - 11388 (-)
Type: CAZyme
Location: 9787 - 11388 (-)
Gene ID: Rep_479_c_385_9
Type: pfam
Location: 11426 - 12541 (-)
Type: pfam
Location: 11426 - 12541 (-)
Gene ID: Rep_479_c_385_10
Type: pfam
Location: 12627 - 13490 (-)
Type: pfam
Location: 12627 - 13490 (-)
Gene ID: Rep_479_c_385_11
Type: CAZyme
Location: 13631 - 16582 (-)
Type: CAZyme
Location: 13631 - 16582 (-)
Gene ID: Rep_479_c_385_12
Type: TC
Location: 16739 - 18388 (-)
Type: TC
Location: 16739 - 18388 (-)
Gene ID: Rep_479_c_385_13
Type: TC
Location: 18401 - 21598 (-)
Type: TC
Location: 18401 - 21598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.