Cluster: Rep_479_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_479
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_479_c_18 | Rep_479_c_18_20 | 23928 | 25385 | + | 2.A.68.1.2 |
| STP | Rep_479_c_18 | Rep_479_c_18_21 | 25374 | 26366 | - | HTH_18 |
| TC | Rep_479_c_18 | Rep_479_c_18_22 | 26840 | 27304 | + | 9.A.24.1.7 |
| STP | Rep_479_c_18 | Rep_479_c_18_23 | 27496 | 27891 | - | Glyoxalase |
| TC | Rep_479_c_18 | Rep_479_c_18_24 | 27964 | 28638 | - | 1.A.8.3.1 |
| pfam | Rep_479_c_18 | Rep_479_c_18_25 | 28930 | 29376 | - | DUF5053 |
| NULL(UNKNOWN) | Rep_479_c_18 | Rep_479_c_18_26 | 29862 | 30572 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_479_c_18 | Rep_479_c_18_27 | 30816 | 32825 | - | GH13_8 |
Gene ID: Rep_479_c_18_20
Type: TC
Location: 23928 - 25385 (+)
Type: TC
Location: 23928 - 25385 (+)
Gene ID: Rep_479_c_18_21
Type: STP
Location: 25374 - 26366 (-)
Type: STP
Location: 25374 - 26366 (-)
Gene ID: Rep_479_c_18_22
Type: TC
Location: 26840 - 27304 (+)
Type: TC
Location: 26840 - 27304 (+)
Gene ID: Rep_479_c_18_23
Type: STP
Location: 27496 - 27891 (-)
Type: STP
Location: 27496 - 27891 (-)
Gene ID: Rep_479_c_18_24
Type: TC
Location: 27964 - 28638 (-)
Type: TC
Location: 27964 - 28638 (-)
Gene ID: Rep_479_c_18_25
Type: pfam
Location: 28930 - 29376 (-)
Type: pfam
Location: 28930 - 29376 (-)
Gene ID: Rep_479_c_18_26
Type:
Location: 29862 - 30572 (+)
Type:
Location: 29862 - 30572 (+)
Gene ID: Rep_479_c_18_27
Type: CAZyme
Location: 30816 - 32825 (-)
Type: CAZyme
Location: 30816 - 32825 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.