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Cluster: Rep_479_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_479_c_311 Rep_479_c_311_1 324 1691 - 2.A.1.10.1
TC Rep_479_c_311 Rep_479_c_311_2 1705 3588 - 1.B.14.3.1
pfam Rep_479_c_311 Rep_479_c_311_3 3675 4352 + PCMT | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam Rep_479_c_311 Rep_479_c_311_4 4355 6094 - PDDEXK_9 | AAA-ATPase_like
CAZyme Rep_479_c_311 Rep_479_c_311_5 6172 8649 - GH2
CAZyme Rep_479_c_311 Rep_479_c_311_6 8682 9866 - GH53
TF Rep_479_c_311 Rep_479_c_311_7 10102 11109 + LacI
TC Rep_479_c_311 Rep_479_c_311_8 11141 12514 + 2.A.2.6.2
Gene ID: Rep_479_c_311_1
Type: TC
Location: 324 - 1691 (-)
Gene ID: Rep_479_c_311_2
Type: TC
Location: 1705 - 3588 (-)
Gene ID: Rep_479_c_311_3
Type: pfam
Location: 3675 - 4352 (+)
Gene ID: Rep_479_c_311_4
Type: pfam
Location: 4355 - 6094 (-)
Gene ID: Rep_479_c_311_5
Type: CAZyme
Location: 6172 - 8649 (-)
Gene ID: Rep_479_c_311_6
Type: CAZyme
Location: 8682 - 9866 (-)
Gene ID: Rep_479_c_311_7
Type: TF
Location: 10102 - 11109 (+)
Gene ID: Rep_479_c_311_8
Type: TC
Location: 11141 - 12514 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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