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Cluster: Rep_479_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_479_c_240 Rep_479_c_240_7 5321 6409 - GT4
pfam Rep_479_c_240 Rep_479_c_240_8 6420 8372 - Sulfatase
pfam Rep_479_c_240 Rep_479_c_240_9 8430 10268 - Sulfatase
CAZyme Rep_479_c_240 Rep_479_c_240_10 10278 11267 - GT9
pfam Rep_479_c_240 Rep_479_c_240_11 11267 11995 - CTP_transf_3 | NTP_transf_3
pfam Rep_479_c_240 Rep_479_c_240_12 12020 12931 - Lip_A_acyltrans
CAZyme Rep_479_c_240 Rep_479_c_240_13 12934 14187 - GT30
TF Rep_479_c_240 Rep_479_c_240_14 14326 14877 - HTH_3
pfam Rep_479_c_240 Rep_479_c_240_15 15127 15474 - SUI1
TC Rep_479_c_240 Rep_479_c_240_16 15585 18083 + 1.B.14.6.9
Gene ID: Rep_479_c_240_7
Type: CAZyme
Location: 5321 - 6409 (-)
Gene ID: Rep_479_c_240_8
Type: pfam
Location: 6420 - 8372 (-)
Gene ID: Rep_479_c_240_9
Type: pfam
Location: 8430 - 10268 (-)
Gene ID: Rep_479_c_240_10
Type: CAZyme
Location: 10278 - 11267 (-)
Gene ID: Rep_479_c_240_11
Type: pfam
Location: 11267 - 11995 (-)
Gene ID: Rep_479_c_240_12
Type: pfam
Location: 12020 - 12931 (-)
Gene ID: Rep_479_c_240_13
Type: CAZyme
Location: 12934 - 14187 (-)
Gene ID: Rep_479_c_240_14
Type: TF
Location: 14326 - 14877 (-)
Gene ID: Rep_479_c_240_15
Type: pfam
Location: 15127 - 15474 (-)
Gene ID: Rep_479_c_240_16
Type: TC
Location: 15585 - 18083 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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