dbCAN Logo

Cluster: Rep_479_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_479_c_218 Rep_479_c_218_6 2271 3143 - 9.A.25.1.1
pfam Rep_479_c_218 Rep_479_c_218_7 3147 4178 - FMN_red | Flavodoxin_4 | Flavodoxin_5 | Cyclophil_like2
pfam Rep_479_c_218 Rep_479_c_218_8 4183 4395 - Tautomerase
TC Rep_479_c_218 Rep_479_c_218_9 4575 5426 - 8.A.5.1.4
TC Rep_479_c_218 Rep_479_c_218_10 5430 6668 - 9.B.169.1.8
pfam Rep_479_c_218 Rep_479_c_218_11 6665 7987 - Cupin_1 | Cupin_2 | Lactamase_B_2 | Lactamase_B_3
pfam Rep_479_c_218 Rep_479_c_218_12 8011 10194 - TonB_dep_Rec_b-barrel
CAZyme Rep_479_c_218 Rep_479_c_218_13 10208 12565 - GH3
Gene ID: Rep_479_c_218_6
Type: TC
Location: 2271 - 3143 (-)
Gene ID: Rep_479_c_218_7
Type: pfam
Location: 3147 - 4178 (-)
Gene ID: Rep_479_c_218_8
Type: pfam
Location: 4183 - 4395 (-)
Gene ID: Rep_479_c_218_9
Type: TC
Location: 4575 - 5426 (-)
Gene ID: Rep_479_c_218_10
Type: TC
Location: 5430 - 6668 (-)
Gene ID: Rep_479_c_218_11
Type: pfam
Location: 6665 - 7987 (-)
Gene ID: Rep_479_c_218_12
Type: pfam
Location: 8011 - 10194 (-)
Gene ID: Rep_479_c_218_13
Type: CAZyme
Location: 10208 - 12565 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List