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Cluster: Rep_479_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_479_c_211 Rep_479_c_211_7 9335 11476 - GH97
CAZyme Rep_479_c_211 Rep_479_c_211_8 11683 13029 - GH13
CAZyme Rep_479_c_211 Rep_479_c_211_9 13026 14372 - GH13
NULL(UNKNOWN) Rep_479_c_211 Rep_479_c_211_10 14388 15545 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_479_c_211 Rep_479_c_211_11 15564 17357 - SusD_RagB | SusD-like_3
TC Rep_479_c_211 Rep_479_c_211_12 17387 20341 - 1.B.14.6.1
pfam Rep_479_c_211 Rep_479_c_211_13 20538 22184 - DUF6377
TC Rep_479_c_211 Rep_479_c_211_14 22220 24025 - 4.C.1.1.14
Gene ID: Rep_479_c_211_7
Type: CAZyme
Location: 9335 - 11476 (-)
Gene ID: Rep_479_c_211_8
Type: CAZyme
Location: 11683 - 13029 (-)
Gene ID: Rep_479_c_211_9
Type: CAZyme
Location: 13026 - 14372 (-)
Gene ID: Rep_479_c_211_10
Type:
Location: 14388 - 15545 (-)
Gene ID: Rep_479_c_211_11
Type: pfam
Location: 15564 - 17357 (-)
Gene ID: Rep_479_c_211_12
Type: TC
Location: 17387 - 20341 (-)
Gene ID: Rep_479_c_211_13
Type: pfam
Location: 20538 - 22184 (-)
Gene ID: Rep_479_c_211_14
Type: TC
Location: 22220 - 24025 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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