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Cluster: Rep_479_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_479_c_166 Rep_479_c_166_1 27 701 - 9.B.186.1.3
TC Rep_479_c_166 Rep_479_c_166_2 796 2124 - 2.A.66.1.13
CAZyme Rep_479_c_166 Rep_479_c_166_3 2129 3292 - CE9
NULL(UNKNOWN) Rep_479_c_166 Rep_479_c_166_4 3402 3785 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_479_c_166 Rep_479_c_166_5 3830 5173 - 3.A.1.11.2
TC Rep_479_c_166 Rep_479_c_166_6 5173 5964 - 3.A.1.11.8
TC Rep_479_c_166 Rep_479_c_166_7 5961 6752 - 3.A.1.11.8
TC Rep_479_c_166 Rep_479_c_166_8 6954 8333 - 3.A.1.11.8
pfam Rep_479_c_166 Rep_479_c_166_9 8488 9249 + adh_short | KR | adh_short_C2
CAZyme Rep_479_c_166 Rep_479_c_166_10 9363 11567 + GH36
Gene ID: Rep_479_c_166_1
Type: TC
Location: 27 - 701 (-)
Gene ID: Rep_479_c_166_2
Type: TC
Location: 796 - 2124 (-)
Gene ID: Rep_479_c_166_3
Type: CAZyme
Location: 2129 - 3292 (-)
Gene ID: Rep_479_c_166_4
Type:
Location: 3402 - 3785 (-)
Gene ID: Rep_479_c_166_5
Type: TC
Location: 3830 - 5173 (-)
Gene ID: Rep_479_c_166_6
Type: TC
Location: 5173 - 5964 (-)
Gene ID: Rep_479_c_166_7
Type: TC
Location: 5961 - 6752 (-)
Gene ID: Rep_479_c_166_8
Type: TC
Location: 6954 - 8333 (-)
Gene ID: Rep_479_c_166_9
Type: pfam
Location: 8488 - 9249 (+)
Gene ID: Rep_479_c_166_10
Type: CAZyme
Location: 9363 - 11567 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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