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Cluster: Rep_479_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_479_c_84 Rep_479_c_84_16 24152 28084 + GH3 | GH9
TF Rep_479_c_84 Rep_479_c_84_17 28206 32240 - HTH_AraC | HTH_AraC
CAZyme Rep_479_c_84 Rep_479_c_84_18 32494 34869 + GH31_3
TC Rep_479_c_84 Rep_479_c_84_19 35071 38244 + 1.B.14.6.1
pfam Rep_479_c_84 Rep_479_c_84_20 38270 39955 + SusD_RagB | SusD-like_3
pfam Rep_479_c_84 Rep_479_c_84_21 40039 41292 + GlcNAc_2-epim
CAZyme Rep_479_c_84 Rep_479_c_84_22 41296 43821 + GH9
TC Rep_479_c_84 Rep_479_c_84_23 43882 44655 - 3.A.1.15.12
Gene ID: Rep_479_c_84_16
Type: CAZyme
Location: 24152 - 28084 (+)
Gene ID: Rep_479_c_84_17
Type: TF
Location: 28206 - 32240 (-)
Gene ID: Rep_479_c_84_18
Type: CAZyme
Location: 32494 - 34869 (+)
Gene ID: Rep_479_c_84_19
Type: TC
Location: 35071 - 38244 (+)
Gene ID: Rep_479_c_84_20
Type: pfam
Location: 38270 - 39955 (+)
Gene ID: Rep_479_c_84_21
Type: pfam
Location: 40039 - 41292 (+)
Gene ID: Rep_479_c_84_22
Type: CAZyme
Location: 41296 - 43821 (+)
Gene ID: Rep_479_c_84_23
Type: TC
Location: 43882 - 44655 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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