Cluster: Rep_476_CGC49
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_476
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_476_c_169 | Rep_476_c_169_6 | 4782 | 6749 | - | GT51 |
| pfam | Rep_476_c_169 | Rep_476_c_169_7 | 6908 | 8236 | - | OEP | OEP |
| pfam | Rep_476_c_169 | Rep_476_c_169_8 | 8267 | 9370 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | Rep_476_c_169 | Rep_476_c_169_9 | 9449 | 10690 | - | 3.A.1.122.2 |
| TC | Rep_476_c_169 | Rep_476_c_169_10 | 10696 | 11955 | - | 3.A.1.122.2 |
| TC | Rep_476_c_169 | Rep_476_c_169_11 | 12010 | 12726 | - | 3.A.1.122.2 |
Gene ID: Rep_476_c_169_6
Type: CAZyme
Location: 4782 - 6749 (-)
Type: CAZyme
Location: 4782 - 6749 (-)
Gene ID: Rep_476_c_169_7
Type: pfam
Location: 6908 - 8236 (-)
Type: pfam
Location: 6908 - 8236 (-)
Gene ID: Rep_476_c_169_8
Type: pfam
Location: 8267 - 9370 (-)
Type: pfam
Location: 8267 - 9370 (-)
Gene ID: Rep_476_c_169_9
Type: TC
Location: 9449 - 10690 (-)
Type: TC
Location: 9449 - 10690 (-)
Gene ID: Rep_476_c_169_10
Type: TC
Location: 10696 - 11955 (-)
Type: TC
Location: 10696 - 11955 (-)
Gene ID: Rep_476_c_169_11
Type: TC
Location: 12010 - 12726 (-)
Type: TC
Location: 12010 - 12726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides rodentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.