dbCAN Logo

Cluster: Rep_476_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_476_c_100 Rep_476_c_100_19 19570 20991 + CE20
CAZyme Rep_476_c_100 Rep_476_c_100_20 21134 23668 - GH9
CAZyme Rep_476_c_100 Rep_476_c_100_21 24013 27105 + GH30
CAZyme Rep_476_c_100 Rep_476_c_100_22 27151 28881 + GH9
TC Rep_476_c_100 Rep_476_c_100_23 28901 29767 - 3.A.1.15.15
pfam Rep_476_c_100 Rep_476_c_100_24 29788 30690 - ZnuA
pfam Rep_476_c_100 Rep_476_c_100_25 30760 31425 - Methyltransf_30
TC Rep_476_c_100 Rep_476_c_100_26 31588 32067 - 9.B.27.3.1
Gene ID: Rep_476_c_100_19
Type: CAZyme
Location: 19570 - 20991 (+)
Gene ID: Rep_476_c_100_20
Type: CAZyme
Location: 21134 - 23668 (-)
Gene ID: Rep_476_c_100_21
Type: CAZyme
Location: 24013 - 27105 (+)
Gene ID: Rep_476_c_100_22
Type: CAZyme
Location: 27151 - 28881 (+)
Gene ID: Rep_476_c_100_23
Type: TC
Location: 28901 - 29767 (-)
Gene ID: Rep_476_c_100_24
Type: pfam
Location: 29788 - 30690 (-)
Gene ID: Rep_476_c_100_25
Type: pfam
Location: 30760 - 31425 (-)
Gene ID: Rep_476_c_100_26
Type: TC
Location: 31588 - 32067 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List