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Cluster: Rep_476_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_476_c_58 Rep_476_c_58_40 50042 52075 - GH182
CAZyme Rep_476_c_58 Rep_476_c_58_41 52160 53161 - GH43_3
CAZyme Rep_476_c_58 Rep_476_c_58_42 53222 54172 - GH43_31
CAZyme Rep_476_c_58 Rep_476_c_58_43 54318 55421 - GH105
CAZyme Rep_476_c_58 Rep_476_c_58_44 55479 56615 - GH130_3
sulfatase Rep_476_c_58 Rep_476_c_58_45 56658 58520 - S1_24
CAZyme Rep_476_c_58 Rep_476_c_58_46 58530 61253 - GH2
CAZyme Rep_476_c_58 Rep_476_c_58_47 61428 62543 - GH105
sulfatase Rep_476_c_58 Rep_476_c_58_48 62592 63824 - S1_22
pfam Rep_476_c_58 Rep_476_c_58_49 63856 65913 - SusD_RagB | SusD-like_3
TC Rep_476_c_58 Rep_476_c_58_50 65936 67009 - 1.B.14.6.13
Gene ID: Rep_476_c_58_40
Type: CAZyme
Location: 50042 - 52075 (-)
Gene ID: Rep_476_c_58_41
Type: CAZyme
Location: 52160 - 53161 (-)
Gene ID: Rep_476_c_58_42
Type: CAZyme
Location: 53222 - 54172 (-)
Gene ID: Rep_476_c_58_43
Type: CAZyme
Location: 54318 - 55421 (-)
Gene ID: Rep_476_c_58_44
Type: CAZyme
Location: 55479 - 56615 (-)
Gene ID: Rep_476_c_58_45
Type: sulfatase
Location: 56658 - 58520 (-)
Gene ID: Rep_476_c_58_46
Type: CAZyme
Location: 58530 - 61253 (-)
Gene ID: Rep_476_c_58_47
Type: CAZyme
Location: 61428 - 62543 (-)
Gene ID: Rep_476_c_58_48
Type: sulfatase
Location: 62592 - 63824 (-)
Gene ID: Rep_476_c_58_49
Type: pfam
Location: 63856 - 65913 (-)
Gene ID: Rep_476_c_58_50
Type: TC
Location: 65936 - 67009 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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