Cluster: Rep_472_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_472
- CGC Family ID: CGCFAM_00384
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_472_c_19 | Rep_472_c_19_30 | 39316 | 42336 | + | GH55_3 |
| CAZyme | Rep_472_c_19 | Rep_472_c_19_31 | 42346 | 45345 | + | GH55_3 |
| NULL(UNKNOWN) | Rep_472_c_19 | Rep_472_c_19_32 | 45432 | 45878 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_472_c_19 | Rep_472_c_19_33 | 45944 | 47044 | - | DUF6340 |
| TC | Rep_472_c_19 | Rep_472_c_19_34 | 47180 | 50506 | - | 3.A.5.1.1 |
Gene ID: Rep_472_c_19_30
Type: CAZyme
Location: 39316 - 42336 (+)
Type: CAZyme
Location: 39316 - 42336 (+)
Gene ID: Rep_472_c_19_31
Type: CAZyme
Location: 42346 - 45345 (+)
Type: CAZyme
Location: 42346 - 45345 (+)
Gene ID: Rep_472_c_19_32
Type:
Location: 45432 - 45878 (-)
Type:
Location: 45432 - 45878 (-)
Gene ID: Rep_472_c_19_33
Type: pfam
Location: 45944 - 47044 (-)
Type: pfam
Location: 45944 - 47044 (-)
Gene ID: Rep_472_c_19_34
Type: TC
Location: 47180 - 50506 (-)
Type: TC
Location: 47180 - 50506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905203765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.