dbCAN Logo

Cluster: Rep_472_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_472_c_205 Rep_472_c_205_21 26191 27651 - GT2
pfam Rep_472_c_205 Rep_472_c_205_22 27698 29557 - Metallophos | PQQ | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
NULL(UNKNOWN) Rep_472_c_205 Rep_472_c_205_23 29583 32648 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_472_c_205 Rep_472_c_205_24 32658 34118 - 2.A.21.3.7
CAZyme Rep_472_c_205 Rep_472_c_205_25 34181 35347 - GH171
NULL(UNKNOWN) Rep_472_c_205 Rep_472_c_205_26 36077 37369 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_472_c_205 Rep_472_c_205_27 37524 39209 - SusD_RagB | SusD-like_3
TC Rep_472_c_205 Rep_472_c_205_28 39231 42653 - 1.B.14.6.1
NULL(UNKNOWN) Rep_472_c_205 Rep_472_c_205_29 43067 43915 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_472_c_205 Rep_472_c_205_30 44171 44293 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_472_c_205 Rep_472_c_205_31 44334 47819 + 1.B.14.6.1
pfam Rep_472_c_205 Rep_472_c_205_32 47832 49697 + SusD_RagB | SusD-like_3
pfam Rep_472_c_205 Rep_472_c_205_33 49786 50793 - Semialdhyde_dh | Semialdhyde_dhC
TC Rep_472_c_205 Rep_472_c_205_34 50962 53088 + 2.A.37.2.5
pfam Rep_472_c_205 Rep_472_c_205_35 53088 53798 + ThiF
TC Rep_472_c_205 Rep_472_c_205_36 53808 54470 + 3.A.1.122.2
pfam Rep_472_c_205 Rep_472_c_205_37 54508 56832 - CarboxypepD_reg | CarbopepD_reg_2 | OMP_b-brl_3
pfam Rep_472_c_205 Rep_472_c_205_38 56956 57900 - HHH_3 | HHH_3 | HHH_3
TC Rep_472_c_205 Rep_472_c_205_39 57907 59274 - 2.A.22.5.3
NULL(UNKNOWN) Rep_472_c_205 Rep_472_c_205_40 59377 59760 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_472_c_205 Rep_472_c_205_41 59761 61059 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC Rep_472_c_205 Rep_472_c_205_42 61161 63188 - 2.A.21.9.2
Gene ID: Rep_472_c_205_21
Type: CAZyme
Location: 26191 - 27651 (-)
Gene ID: Rep_472_c_205_22
Type: pfam
Location: 27698 - 29557 (-)
Gene ID: Rep_472_c_205_23
Type:
Location: 29583 - 32648 (-)
Gene ID: Rep_472_c_205_24
Type: TC
Location: 32658 - 34118 (-)
Gene ID: Rep_472_c_205_25
Type: CAZyme
Location: 34181 - 35347 (-)
Gene ID: Rep_472_c_205_26
Type:
Location: 36077 - 37369 (-)
Gene ID: Rep_472_c_205_27
Type: pfam
Location: 37524 - 39209 (-)
Gene ID: Rep_472_c_205_28
Type: TC
Location: 39231 - 42653 (-)
Gene ID: Rep_472_c_205_29
Type:
Location: 43067 - 43915 (-)
Gene ID: Rep_472_c_205_30
Type:
Location: 44171 - 44293 (+)
Gene ID: Rep_472_c_205_31
Type: TC
Location: 44334 - 47819 (+)
Gene ID: Rep_472_c_205_32
Type: pfam
Location: 47832 - 49697 (+)
Gene ID: Rep_472_c_205_33
Type: pfam
Location: 49786 - 50793 (-)
Gene ID: Rep_472_c_205_34
Type: TC
Location: 50962 - 53088 (+)
Gene ID: Rep_472_c_205_35
Type: pfam
Location: 53088 - 53798 (+)
Gene ID: Rep_472_c_205_36
Type: TC
Location: 53808 - 54470 (+)
Gene ID: Rep_472_c_205_37
Type: pfam
Location: 54508 - 56832 (-)
Gene ID: Rep_472_c_205_38
Type: pfam
Location: 56956 - 57900 (-)
Gene ID: Rep_472_c_205_39
Type: TC
Location: 57907 - 59274 (-)
Gene ID: Rep_472_c_205_40
Type:
Location: 59377 - 59760 (+)
Gene ID: Rep_472_c_205_41
Type: pfam
Location: 59761 - 61059 (-)
Gene ID: Rep_472_c_205_42
Type: TC
Location: 61161 - 63188 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List