Cluster: Rep_472_CGC44
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_472
- CGC Family ID: CGCFAM_00303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_472_c_164 | Rep_472_c_164_1 | 169 | 3246 | + | 1.B.14.6.1 |
| sulfatase | Rep_472_c_164 | Rep_472_c_164_2 | 3273 | 4808 | + | S1_27 |
| CAZyme | Rep_472_c_164 | Rep_472_c_164_3 | 4961 | 6943 | + | GH63 |
Gene ID: Rep_472_c_164_1
Type: TC
Location: 169 - 3246 (+)
Type: TC
Location: 169 - 3246 (+)
Gene ID: Rep_472_c_164_2
Type: sulfatase
Location: 3273 - 4808 (+)
Type: sulfatase
Location: 3273 - 4808 (+)
Gene ID: Rep_472_c_164_3
Type: CAZyme
Location: 4961 - 6943 (+)
Type: CAZyme
Location: 4961 - 6943 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905203765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_472_c_164_1 | vegan > omnivore | 1.33435 | 0.01309 |
| Rep_472_c_164_2 | vegan > omnivore | 1.11788 | 0.01536 |
| Rep_472_c_164_3 | vegan > omnivore | 1.03527 | 0.01536 |