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Cluster: Rep_472_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_472_c_157 Rep_472_c_157_17 18544 20865 - GH20
CAZyme Rep_472_c_157 Rep_472_c_157_18 20862 22313 - GH125
CAZyme Rep_472_c_157 Rep_472_c_157_19 22326 23930 - GH63
pfam Rep_472_c_157 Rep_472_c_157_20 23951 25093 - Alk_phosphatase | Metalloenzyme
pfam Rep_472_c_157 Rep_472_c_157_21 25140 26006 - Exo_endo_phos
CAZyme Rep_472_c_157 Rep_472_c_157_22 26025 28955 - GH92
TC Rep_472_c_157 Rep_472_c_157_23 29088 30743 - 8.A.46.1.3
TC Rep_472_c_157 Rep_472_c_157_24 30760 33909 - 1.B.14.6.1
Gene ID: Rep_472_c_157_17
Type: CAZyme
Location: 18544 - 20865 (-)
Gene ID: Rep_472_c_157_18
Type: CAZyme
Location: 20862 - 22313 (-)
Gene ID: Rep_472_c_157_19
Type: CAZyme
Location: 22326 - 23930 (-)
Gene ID: Rep_472_c_157_20
Type: pfam
Location: 23951 - 25093 (-)
Gene ID: Rep_472_c_157_21
Type: pfam
Location: 25140 - 26006 (-)
Gene ID: Rep_472_c_157_22
Type: CAZyme
Location: 26025 - 28955 (-)
Gene ID: Rep_472_c_157_23
Type: TC
Location: 29088 - 30743 (-)
Gene ID: Rep_472_c_157_24
Type: TC
Location: 30760 - 33909 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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