dbCAN Logo

Cluster: Rep_472_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_472_c_151 Rep_472_c_151_9 9890 12946 + 1.B.14.6.2
TC Rep_472_c_151 Rep_472_c_151_10 12967 14514 + 8.A.46.1.3
pfam Rep_472_c_151 Rep_472_c_151_11 14514 16091 + Sde182_NH-like | Sde0182_C
CAZyme Rep_472_c_151 Rep_472_c_151_12 16125 17324 + CE1
CAZyme Rep_472_c_151 Rep_472_c_151_13 17338 19674 + GH3
peptidase Rep_472_c_151 Rep_472_c_151_14 19951 20769 - S09.UNW
TC Rep_472_c_151 Rep_472_c_151_15 20795 22468 - 8.A.46.1.5
TC Rep_472_c_151 Rep_472_c_151_16 22490 25675 - 1.B.14.6.1
Gene ID: Rep_472_c_151_9
Type: TC
Location: 9890 - 12946 (+)
Gene ID: Rep_472_c_151_10
Type: TC
Location: 12967 - 14514 (+)
Gene ID: Rep_472_c_151_11
Type: pfam
Location: 14514 - 16091 (+)
Gene ID: Rep_472_c_151_12
Type: CAZyme
Location: 16125 - 17324 (+)
Gene ID: Rep_472_c_151_13
Type: CAZyme
Location: 17338 - 19674 (+)
Gene ID: Rep_472_c_151_14
Type: peptidase
Location: 19951 - 20769 (-)
Gene ID: Rep_472_c_151_15
Type: TC
Location: 20795 - 22468 (-)
Gene ID: Rep_472_c_151_16
Type: TC
Location: 22490 - 25675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List