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Cluster: Rep_472_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_472_c_128 Rep_472_c_128_21 29799 31184 - 2.A.2.3.6
CAZyme Rep_472_c_128 Rep_472_c_128_22 31198 32382 - GH130_1
CAZyme Rep_472_c_128 Rep_472_c_128_23 32775 33839 - GH5_26
CAZyme Rep_472_c_128 Rep_472_c_128_24 33851 37573 - GH2
CAZyme Rep_472_c_128 Rep_472_c_128_25 37580 38755 - GH26
pfam Rep_472_c_128 Rep_472_c_128_26 38782 39132 - TIG
TC Rep_472_c_128 Rep_472_c_128_27 39180 40919 - 8.A.46.1.3
TC Rep_472_c_128 Rep_472_c_128_28 40939 44058 - 1.B.14.6.1
CAZyme Rep_472_c_128 Rep_472_c_128_29 44320 45603 - CE7
Gene ID: Rep_472_c_128_21
Type: TC
Location: 29799 - 31184 (-)
Gene ID: Rep_472_c_128_22
Type: CAZyme
Location: 31198 - 32382 (-)
Gene ID: Rep_472_c_128_23
Type: CAZyme
Location: 32775 - 33839 (-)
Gene ID: Rep_472_c_128_24
Type: CAZyme
Location: 33851 - 37573 (-)
Gene ID: Rep_472_c_128_25
Type: CAZyme
Location: 37580 - 38755 (-)
Gene ID: Rep_472_c_128_26
Type: pfam
Location: 38782 - 39132 (-)
Gene ID: Rep_472_c_128_27
Type: TC
Location: 39180 - 40919 (-)
Gene ID: Rep_472_c_128_28
Type: TC
Location: 40939 - 44058 (-)
Gene ID: Rep_472_c_128_29
Type: CAZyme
Location: 44320 - 45603 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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