Cluster: Rep_472_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: arabinogalactan
- Genome ID: Rep_472
- CGC Family ID: CGCFAM_00225
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_472_c_128 | Rep_472_c_128_1 | 503 | 3229 | + | GH97 |
| CAZyme | Rep_472_c_128 | Rep_472_c_128_2 | 3235 | 5637 | + | CBM32 | GH43_34 |
| CAZyme | Rep_472_c_128 | Rep_472_c_128_3 | 5662 | 8067 | + | GH127 |
| peptidase | Rep_472_c_128 | Rep_472_c_128_4 | 8080 | 10329 | + | S09.UPB |
| pfam | Rep_472_c_128 | Rep_472_c_128_5 | 10454 | 11779 | + | OEP | OEP |
| TC | Rep_472_c_128 | Rep_472_c_128_6 | 11805 | 12905 | + | 8.A.1.1.2 |
Gene ID: Rep_472_c_128_1
Type: CAZyme
Location: 503 - 3229 (+)
Type: CAZyme
Location: 503 - 3229 (+)
Gene ID: Rep_472_c_128_2
Type: CAZyme
Location: 3235 - 5637 (+)
Type: CAZyme
Location: 3235 - 5637 (+)
Gene ID: Rep_472_c_128_3
Type: CAZyme
Location: 5662 - 8067 (+)
Type: CAZyme
Location: 5662 - 8067 (+)
Gene ID: Rep_472_c_128_4
Type: peptidase
Location: 8080 - 10329 (+)
Type: peptidase
Location: 8080 - 10329 (+)
Gene ID: Rep_472_c_128_5
Type: pfam
Location: 10454 - 11779 (+)
Type: pfam
Location: 10454 - 11779 (+)
Gene ID: Rep_472_c_128_6
Type: TC
Location: 11805 - 12905 (+)
Type: TC
Location: 11805 - 12905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905203765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.