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Cluster: Rep_472_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_472_c_114 Rep_472_c_114_46 71415 73607 - GH36
TC Rep_472_c_114 Rep_472_c_114_47 73756 75168 + 1.C.39.13.1
STP Rep_472_c_114 Rep_472_c_114_48 75265 76152 - PfkB
TC Rep_472_c_114 Rep_472_c_114_49 76336 77511 - 2.A.1.7.17
CAZyme Rep_472_c_114 Rep_472_c_114_50 77532 79346 - GH32
CAZyme Rep_472_c_114 Rep_472_c_114_51 79494 81593 - GH172
CAZyme Rep_472_c_114 Rep_472_c_114_52 81566 83035 - GH32
CAZyme Rep_472_c_114 Rep_472_c_114_53 83047 85182 - GH32
pfam Rep_472_c_114 Rep_472_c_114_54 85243 87027 - SusD_RagB | SusD-like_3
TC Rep_472_c_114 Rep_472_c_114_55 87048 90119 - 1.B.14.6.13
Gene ID: Rep_472_c_114_46
Type: CAZyme
Location: 71415 - 73607 (-)
Gene ID: Rep_472_c_114_47
Type: TC
Location: 73756 - 75168 (+)
Gene ID: Rep_472_c_114_48
Type: STP
Location: 75265 - 76152 (-)
Gene ID: Rep_472_c_114_49
Type: TC
Location: 76336 - 77511 (-)
Gene ID: Rep_472_c_114_50
Type: CAZyme
Location: 77532 - 79346 (-)
Gene ID: Rep_472_c_114_51
Type: CAZyme
Location: 79494 - 81593 (-)
Gene ID: Rep_472_c_114_52
Type: CAZyme
Location: 81566 - 83035 (-)
Gene ID: Rep_472_c_114_53
Type: CAZyme
Location: 83047 - 85182 (-)
Gene ID: Rep_472_c_114_54
Type: pfam
Location: 85243 - 87027 (-)
Gene ID: Rep_472_c_114_55
Type: TC
Location: 87048 - 90119 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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