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Cluster: Rep_472_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_472_c_107 Rep_472_c_107_20 24922 26154 + 9.B.156.3.1
pfam Rep_472_c_107 Rep_472_c_107_21 26220 26636 + YbeY
sulfatase Rep_472_c_107 Rep_472_c_107_22 27162 28301 - S1_22
CAZyme Rep_472_c_107 Rep_472_c_107_23 28318 30348 - GH182
CAZyme Rep_472_c_107 Rep_472_c_107_24 30380 33106 - CBM67 | GH78
CAZyme Rep_472_c_107 Rep_472_c_107_25 33157 34146 - GH43_3
CAZyme Rep_472_c_107 Rep_472_c_107_26 34216 35160 - GH43_31
CAZyme Rep_472_c_107 Rep_472_c_107_27 35176 36144 - GH43_31
CAZyme Rep_472_c_107 Rep_472_c_107_28 36357 39005 - GH43_31
Gene ID: Rep_472_c_107_20
Type: TC
Location: 24922 - 26154 (+)
Gene ID: Rep_472_c_107_21
Type: pfam
Location: 26220 - 26636 (+)
Gene ID: Rep_472_c_107_22
Type: sulfatase
Location: 27162 - 28301 (-)
Gene ID: Rep_472_c_107_23
Type: CAZyme
Location: 28318 - 30348 (-)
Gene ID: Rep_472_c_107_24
Type: CAZyme
Location: 30380 - 33106 (-)
Gene ID: Rep_472_c_107_25
Type: CAZyme
Location: 33157 - 34146 (-)
Gene ID: Rep_472_c_107_26
Type: CAZyme
Location: 34216 - 35160 (-)
Gene ID: Rep_472_c_107_27
Type: CAZyme
Location: 35176 - 36144 (-)
Gene ID: Rep_472_c_107_28
Type: CAZyme
Location: 36357 - 39005 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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