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Cluster: Rep_472_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_472_c_71 Rep_472_c_71_16 16977 18320 - 2.A.79.1.1
pfam Rep_472_c_71 Rep_472_c_71_17 18487 19203 + DUF6064
pfam Rep_472_c_71 Rep_472_c_71_18 19208 19954 - His_Phos_1 | His_Phos_1
CAZyme Rep_472_c_71 Rep_472_c_71_19 20135 22660 - GT35
CAZyme Rep_472_c_71 Rep_472_c_71_20 22730 24394 - GT3
pfam Rep_472_c_71 Rep_472_c_71_21 24611 25030 - ATP-synt_C | ATP-synt_C
TC Rep_472_c_71 Rep_472_c_71_22 25064 26893 - 3.A.2.3.3
pfam Rep_472_c_71 Rep_472_c_71_23 26890 27495 - ATP-synt_D
TC Rep_472_c_71 Rep_472_c_71_24 27515 28843 - 3.A.2.3.3
TC Rep_472_c_71 Rep_472_c_71_25 28852 30609 - 3.A.2.3.3
Gene ID: Rep_472_c_71_16
Type: TC
Location: 16977 - 18320 (-)
Gene ID: Rep_472_c_71_17
Type: pfam
Location: 18487 - 19203 (+)
Gene ID: Rep_472_c_71_18
Type: pfam
Location: 19208 - 19954 (-)
Gene ID: Rep_472_c_71_19
Type: CAZyme
Location: 20135 - 22660 (-)
Gene ID: Rep_472_c_71_20
Type: CAZyme
Location: 22730 - 24394 (-)
Gene ID: Rep_472_c_71_21
Type: pfam
Location: 24611 - 25030 (-)
Gene ID: Rep_472_c_71_22
Type: TC
Location: 25064 - 26893 (-)
Gene ID: Rep_472_c_71_23
Type: pfam
Location: 26890 - 27495 (-)
Gene ID: Rep_472_c_71_24
Type: TC
Location: 27515 - 28843 (-)
Gene ID: Rep_472_c_71_25
Type: TC
Location: 28852 - 30609 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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