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Cluster: Rep_461_CGC94

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_37 Rep_461_c_37_21 32512 36129 - GH38
CAZyme Rep_461_c_37 Rep_461_c_37_22 36191 37357 - GH183
NULL(UNKNOWN) Rep_461_c_37 Rep_461_c_37_23 37417 37515 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_37 Rep_461_c_37_24 37558 38751 - GH172
CAZyme Rep_461_c_37 Rep_461_c_37_25 38768 41764 - CBM38 | GH116
pfam Rep_461_c_37 Rep_461_c_37_26 41877 42287 - DUF4945
pfam Rep_461_c_37 Rep_461_c_37_27 42312 44141 - SusD_RagB | SusD-like_3
TC Rep_461_c_37 Rep_461_c_37_28 44163 47369 - 1.B.14.6.1
CAZyme Rep_461_c_37 Rep_461_c_37_29 47434 48564 - GH172
Gene ID: Rep_461_c_37_21
Type: CAZyme
Location: 32512 - 36129 (-)
Gene ID: Rep_461_c_37_22
Type: CAZyme
Location: 36191 - 37357 (-)
Gene ID: Rep_461_c_37_23
Type:
Location: 37417 - 37515 (-)
Gene ID: Rep_461_c_37_24
Type: CAZyme
Location: 37558 - 38751 (-)
Gene ID: Rep_461_c_37_25
Type: CAZyme
Location: 38768 - 41764 (-)
Gene ID: Rep_461_c_37_26
Type: pfam
Location: 41877 - 42287 (-)
Gene ID: Rep_461_c_37_27
Type: pfam
Location: 42312 - 44141 (-)
Gene ID: Rep_461_c_37_28
Type: TC
Location: 44163 - 47369 (-)
Gene ID: Rep_461_c_37_29
Type: CAZyme
Location: 47434 - 48564 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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