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Cluster: Rep_461_CGC92

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_36 Rep_461_c_36_24 27496 29817 - GH20
CAZyme Rep_461_c_36 Rep_461_c_36_25 29814 31265 - GH125
CAZyme Rep_461_c_36 Rep_461_c_36_26 31281 32885 - GH63
pfam Rep_461_c_36 Rep_461_c_36_27 32904 34046 - Alk_phosphatase | Metalloenzyme
pfam Rep_461_c_36 Rep_461_c_36_28 34093 34956 - Exo_endo_phos
CAZyme Rep_461_c_36 Rep_461_c_36_29 34976 37909 - GH92
TC Rep_461_c_36 Rep_461_c_36_30 38067 39701 - 8.A.46.1.3
TC Rep_461_c_36 Rep_461_c_36_31 39717 42860 - 1.B.14.6.1
Gene ID: Rep_461_c_36_24
Type: CAZyme
Location: 27496 - 29817 (-)
Gene ID: Rep_461_c_36_25
Type: CAZyme
Location: 29814 - 31265 (-)
Gene ID: Rep_461_c_36_26
Type: CAZyme
Location: 31281 - 32885 (-)
Gene ID: Rep_461_c_36_27
Type: pfam
Location: 32904 - 34046 (-)
Gene ID: Rep_461_c_36_28
Type: pfam
Location: 34093 - 34956 (-)
Gene ID: Rep_461_c_36_29
Type: CAZyme
Location: 34976 - 37909 (-)
Gene ID: Rep_461_c_36_30
Type: TC
Location: 38067 - 39701 (-)
Gene ID: Rep_461_c_36_31
Type: TC
Location: 39717 - 42860 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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